scipion-em


Namescipion-em JSON
Version 3.9.3 PyPI version JSON
download
home_pagehttps://github.com/scipion-em/scipion-em
SummaryThis modules contains classes related with EM
upload_time2024-10-25 07:06:24
maintainerNone
docs_urlNone
authorJ.M. De la Rosa Trevin, Roberto Marabini, Grigory Sharov, Josue Gomez Blanco, Pablo Conesa, Yunior Fonseca Reyna
requires_pythonNone
licenseNone
keywords scipion cryoem imageprocessing scipion-3.0
VCS
bugtrack_url
requirements No requirements were recorded.
Travis-CI No Travis.
coveralls test coverage No coveralls.
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        :alt: Quality Gate Status
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        :target: https://pypi.python.org/pypi/scipion-em
        :alt: Supported Python versions

.. image:: https://img.shields.io/pypi/dm/scipion-em
        :target: https://pypi.python.org/pypi/scipion-em
        :alt: Downloads

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        :alt: Contributor Covenant
        :target: https://www.contributor-covenant.org/version/2/0/code_of_conduct/


pwem
====

**pwem** is a Python module of Scipion framework for image processing in Electron Microscopy

The entire collection is licensed under the terms of the GNU Public License,
version 3 (GPLv3).

Development
-----------

To install **pwem** for development purposes, one can do:

.. code-block:: bash

    # Create a clean virtual environment
    conda create -n scipion python=3.8
    conda activate
    git clone https://github.com/scipion-em/scipion-em.git
    cd scipion-em
    pip install -e .

Running tests
-------------

.. code-block:: bash

    conda activate scipion
    cd scipion-em
    export SCIPION_DOMAIN="pwem"
    python -m unittest discover

API documentation
-----------------

https://scipion-em.github.io/docs/release-3.0.0/api/pwem/pwem.html

            

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