scphylo-tools


Namescphylo-tools JSON
Version 0.0.3 PyPI version JSON
download
home_pagehttps://github.com/faridrashidi/scphylo-tools
Summary
upload_time2023-07-21 07:29:58
maintainerFarid Rashidi
docs_urlNone
authorFarid Rashidi
requires_python>=3.6
licenseBSD
keywords tumor phylogeny single cell tools
VCS
bugtrack_url
requirements No requirements were recorded.
Travis-CI No Travis.
coveralls test coverage No coveralls.
            |Stars| |Compatible| |PyPI| |PyPiDownloads| |Contributions Welcome| |Build Status|
|Docs Status| |Pre-commit| |License| |Code Style|


scphylo-tools: a python toolkit for single-cell tumor phylogenetic analysis
===========================================================================

.. image:: https://raw.githubusercontent.com/faridrashidi/scphylo-tools/main/docs/source/_static/images/overview.png
   :target: https://github.com/faridrashidi/scphylo-tools
   :alt: overview
   :align: center


scphylo-tools is a python toolkit for single-cell tumor phylogenetic analysis


.. |DOI| image:: https://img.shields.io/badge/DOI-10.1101/2021.03.26.437185-orange?logo=gitbook&logoColor=FFFFFF&style=flat-square
    :target: https://doi.org/10.1101/2021.03.26.437185
    :alt: DOI

.. |PyPI| image:: https://img.shields.io/pypi/v/scphylo-tools?logo=PyPi&logoColor=FFFFFF&style=flat-square&color=blue
    :target: https://pypi.org/project/scphylo-tools
    :alt: PyPI

.. |PyPyDownloads| image:: https://img.shields.io/badge/dynamic/json?logo=PyPi&logoColor=FFFFFF&style=flat-square&color=blue&label=downloads&query=%24.total_downloads&url=https%3A%2F%2Fapi.pepy.tech%2Fapi%2Fprojects%2Fscphylo-tools
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.. |PyPiDownloads| image:: https://img.shields.io/pypi/dm/scphylo-tools.svg?logo=docusign&logoColor=FFFFFF&style=flat-square&color=blue
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.. |Stars| image:: https://img.shields.io/github/stars/faridrashidi/scphylo-tools?logo=GitHub&color=yellow&style=flat-square
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.. |Contributions Welcome| image:: https://img.shields.io/static/v1.svg?label=contributions&message=welcome&color=0059b3&logo=handshake&logoColor=FFFFFF&style=flat-square
    :target: https://github.com/faridrashidi/scphylo-tools/blob/master/CONTRIBUTING.rst
    :alt: Contributions Welcome

.. |Compatible| image:: https://img.shields.io/pypi/pyversions/scphylo-tools.svg?logo=python&logoColor=FFFFFF&style=flat-square&color=blue
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.. |Build Status| image:: https://img.shields.io/github/actions/workflow/status/faridrashidi/scphylo-tools/ci.yml?branch=main&label=build&logo=githubactions&logoColor=FFFFFF&style=flat-square
    :target: https://github.com/faridrashidi/scphylo-tools/actions?query=workflow%3ACI
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.. |Docs Status| image:: https://img.shields.io/readthedocs/scphylo-tools/latest?logo=readthedocs&logoColor=FFFFFF&style=flat-square
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.. |Pre-commit| image:: https://img.shields.io/badge/pre--commit.ci-passing-brightgreen?logo=pre-commit&logoColor=white&style=flat-square
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.. |Code Score| image:: https://img.shields.io/lgtm/grade/python/github/faridrashidi/scphylo-tools.svg?logo=lgtm&logoWidth=18&style=flat-square
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.. |Codecov| image:: https://img.shields.io/codecov/c/github/faridrashidi/scphylo-tools?logo=codecov&logoColor=white&style=flat-square
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.. |License| image:: https://img.shields.io/pypi/l/scphylo-tools.svg?logo=creativecommons&logoColor=FFFFFF&style=flat-square&color=blueviolet
    :target: https://github.com/faridrashidi/scphylo-tools/blob/main/LICENSE
    :alt: License



            

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