<!-- Improved compatibility of back to top link: See: https://github.com/othneildrew/Best-README-Template/pull/73 -->
<a name="readme-top"></a>
<!--
*** Thanks for checking out the Best-README-Template. If you have a suggestion
*** that would make this better, please fork the repo and create a pull request
*** or simply open an issue with the tag "enhancement".
*** Don't forget to give the project a star!
*** Thanks again! Now go create something AMAZING! :D
-->
<!-- PROJECT SHIELDS -->
<!--
*** I'm using markdown "reference style" links for readability.
*** Reference links are enclosed in brackets [ ] instead of parentheses ( ).
*** See the bottom of this document for the declaration of the reference variables
*** for contributors-url, forks-url, etc. This is an optional, concise syntax you may use.
*** https://www.markdownguide.org/basic-syntax/#reference-style-links
-->
[![Contributors][contributors-shield]][contributors-url]
[![Forks][forks-shield]][forks-url]
[![Stargazers][stars-shield]][stars-url]
[![Issues][issues-shield]][issues-url]
[![MIT License][license-shield]][license-url]
[![LinkedIn][linkedin-shield]][linkedin-url]
<!-- PROJECT LOGO -->
<br />
<div align="center">
<a href="https://github.com/kuhjuice/sequence_alignment_by_cross_correlation">
<img style='border-radius:30px' src="images/logo.png" alt="Logo" width="120" height="120">
</a>
<h3 align="center">Sequence Alignment<br>by cross correlation</h3>
<p align="center">
This is an implementation of the cross correlation algorithm for DNA/RNA alignment
<br />
<a href="https://github.com/kuhjuice/sequence_alignment_by_cross_correlation"><strong>Explore the docs »</strong></a>
<br />
<br />
<!-- <a href="https://github.com/kuhjuice/sequence_alignment_by_cross_correlation">View Demo</a>
·
-->
<a href="https://github.com/kuhjuice/sequence_alignment_by_cross_correlation/issues">Report Bug</a>
·
<a href="https://github.com/kuhjuice/sequence_alignment_by_cross_correlation/issues">Request Feature</a>
</p>
</div>
<!-- TABLE OF CONTENTS -->
<details>
<summary>Table of Contents</summary>
<ol>
<li>
<a href="#about-the-project">About The Project</a>
<ul>
<li><a href="#built-with">Built With</a></li>
</ul>
</li>
<li>
<a href="#getting-started">Getting Started</a>
<ul>
<li><a href="#prerequisites">Prerequisites</a></li>
<li><a href="#installation">Installation</a></li>
</ul>
</li>
<li><a href="#usage">Usage</a></li>
<li><a href="#roadmap">Roadmap</a></li>
<li><a href="#contributing">Contributing</a></li>
<li><a href="#license">License</a></li>
<li><a href="#contact">Contact</a></li>
<li><a href="#acknowledgments">Acknowledgments</a></li>
</ol>
</details>
<!-- ABOUT THE PROJECT -->
## About The Project
The project is based on the paper [Sequence Alignment by Cross-Correlation](https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2291754/) and bridges the gap between the knowledge and an useful implementation. The underlying technique is the cross correlation algorithm, which can be tested in this [notebook](https://makeabilitylab.github.io/physcomp/signals/ComparingSignals/index.html).
Another [notebook](https://colab.research.google.com/drive/1XC0AIqli6igxuDt0phcmZCu5IK5tiV7W?usp=sharing) can be seen here. The focus of this notebook is to illustrate how we can use the cross correlation for genomic data.
The gene sequences were obtained using the [NCBI](https://www.ncbi.nlm.nih.gov/gene/) database.
![Example Screen Shot][product-screenshot]
<!-- Here's a blank template to get started: To avoid retyping too much info. Do a search and replace with your text editor for the following: `kuhjuice`, `sequence_alignment_by_cross_correlation`, `twitter_handle`, `linkedin_username`, `email_client`, `email`, `project_title`, `project_description` -->
<p align="right">(<a href="#readme-top">back to top</a>)</p>
<!-- GETTING STARTED -->
## Getting Started
This is an example of how you may give instructions on setting up your project locally.
To get a local copy up and running follow these simple example steps.
### Prerequisites
This is an example of how to list things you need to use the software and how to install them.
* python3: https://realpython.com/installing-python/
### Installation
1. Clone the repo
```sh
git clone https://github.com/kuhjuice/sequence_alignment_by_cross_correlation.git
```
2. Navigate into the repo
```sh
cd sequence_alignment_by_cross_correlation
```
3. Install requirements.txt
```sh
pip install -r requirements.txt
```
or
```sh
pip3 install -r requirements.txt
```
4. Ask the CLI for help with
```sh
python3 sequence_alignment_by_cross_correlation.py --help
```
<p align="right">(<a href="#readme-top">back to top</a>)</p>
<!-- USAGE EXAMPLES -->
## Usage
### Example 1
If we want to get an understanding of what the tool can do for us, we can use the help function of the CLI.
```sh
python3 sequence_alignment_by_cross_correlation/sequence_alignment_by_cross_correlation.py --help
```
![Help Screen Shot][help-screenshot]
### Example 2
If we want to find the gene omcB in the genome of Chlamydia Trachomatis we can use the sequence files in `sequencesToTest`
Executing the following will search for the omcB Gene in the genome of Chlamydia Trachomatis
```sh
python3 sequence_alignment_by_cross_correlation/sequence_alignment_by_cross_correlation.py 'sequencesToTest/C_T_genome.fasta' 'sequencesToTest/omcB_C_T_100fit.fna'
```
![Usage Screen Shot][usage-screenshot]
<p align="right">(<a href="#readme-top">back to top</a>)</p>
<!-- ROADMAP -->
## Roadmap
- [ ] Fix Bugs
- [ ] Make it a real package
- [ ] Evalueate if useful for other projects
See the [open issues](https://github.com/kuhjuice/sequence_alignment_by_cross_correlation/issues) for a full list of proposed features (and known issues).
<p align="right">(<a href="#readme-top">back to top</a>)</p>
<!-- CONTRIBUTING -->
## Contributing
Contributions are what make the open source community such an amazing place to learn, inspire, and create. Any contributions you make are **greatly appreciated**.
If you have a suggestion that would make this better, please fork the repo and create a pull request. You can also simply open an issue with the tag "enhancement".
Don't forget to give the project a star! Thanks again!
1. Fork the Project
2. Create your Feature Branch (`git checkout -b feature/AmazingFeature`)
3. Commit your Changes (`git commit -m 'Add some AmazingFeature'`)
4. Push to the Branch (`git push origin feature/AmazingFeature`)
5. Open a Pull Request
<p align="right">(<a href="#readme-top">back to top</a>)</p>
<!-- LICENSE -->
## License
Distributed under the MIT License. See `LICENSE.txt` for more information.
<p align="right">(<a href="#readme-top">back to top</a>)</p>
<!-- CONTACT -->
## Contact
Bo Kern - [@blood_in_the_water@chaos.social ](https://chaos.social/@blood_in_the_water) - bo@blackscript.de
Project Link: [https://github.com/kuhjuice/sequence_alignment_by_cross_correlation](https://github.com/kuhjuice/sequence_alignment_by_cross_correlation)
<p align="right">(<a href="#readme-top">back to top</a>)</p>
<!-- ACKNOWLEDGMENTS -->
## Acknowledgments
* [TU-Berlin](tu.berlin)
* [Carmen Regner](https://www.tu.berlin/mikrobiologie/ueber-uns/team-personen/#c422452)
<p align="right">(<a href="#readme-top">back to top</a>)</p>
<!-- MARKDOWN LINKS & IMAGES -->
<!-- https://www.markdownguide.org/basic-syntax/#reference-style-links -->
[contributors-shield]: https://img.shields.io/github/contributors/kuhjuice/sequence_alignment_by_cross_correlation.svg?style=for-the-badge
[contributors-url]: https://github.com/kuhjuice/sequence_alignment_by_cross_correlation/graphs/contributors
[forks-shield]: https://img.shields.io/github/forks/kuhjuice/sequence_alignment_by_cross_correlation.svg?style=for-the-badge
[forks-url]: https://github.com/kuhjuice/sequence_alignment_by_cross_correlation/network/members
[stars-shield]: https://img.shields.io/github/stars/kuhjuice/sequence_alignment_by_cross_correlation.svg?style=for-the-badge
[stars-url]: https://github.com/kuhjuice/sequence_alignment_by_cross_correlation/stargazers
[issues-shield]: https://img.shields.io/github/issues/kuhjuice/sequence_alignment_by_cross_correlation.svg?style=for-the-badge
[issues-url]: https://github.com/kuhjuice/sequence_alignment_by_cross_correlation/issues
[license-shield]: https://img.shields.io/github/license/kuhjuice/sequence_alignment_by_cross_correlation.svg?style=for-the-badge
[license-url]: https://github.com/kuhjuice/sequence_alignment_by_cross_correlation/blob/master/LICENSE.txt
[linkedin-shield]: https://img.shields.io/badge/-LinkedIn-black.svg?style=for-the-badge&logo=linkedin&colorB=555
[linkedin-url]: https://linkedin.com/in/bpbk
[product-screenshot]: images/productScreenshot.png
[usage-screenshot]: images/usagescreenshot.png
[help-screenshot]: images/helpScreenshot.png
[Next.js]: https://img.shields.io/badge/next.js-000000?style=for-the-badge&logo=nextdotjs&logoColor=white
[Next-url]: https://nextjs.org/
[React.js]: https://img.shields.io/badge/React-20232A?style=for-the-badge&logo=react&logoColor=61DAFB
[React-url]: https://reactjs.org/
[Vue.js]: https://img.shields.io/badge/Vue.js-35495E?style=for-the-badge&logo=vuedotjs&logoColor=4FC08D
[Vue-url]: https://vuejs.org/
[Angular.io]: https://img.shields.io/badge/Angular-DD0031?style=for-the-badge&logo=angular&logoColor=white
[Angular-url]: https://angular.io/
[Svelte.dev]: https://img.shields.io/badge/Svelte-4A4A55?style=for-the-badge&logo=svelte&logoColor=FF3E00
[Svelte-url]: https://svelte.dev/
[Laravel.com]: https://img.shields.io/badge/Laravel-FF2D20?style=for-the-badge&logo=laravel&logoColor=white
[Laravel-url]: https://laravel.com
[Bootstrap.com]: https://img.shields.io/badge/Bootstrap-563D7C?style=for-the-badge&logo=bootstrap&logoColor=white
[Bootstrap-url]: https://getbootstrap.com
[JQuery.com]: https://img.shields.io/badge/jQuery-0769AD?style=for-the-badge&logo=jquery&logoColor=white
[JQuery-url]: https://jquery.com
Raw data
{
"_id": null,
"home_page": "https://github.com/kuhjuice/sequence_alignment_by_cross_correlation",
"name": "sequence-alignment-by-cross-correlation",
"maintainer": "",
"docs_url": null,
"requires_python": ">=3.6",
"maintainer_email": "",
"keywords": "sequence_alignment_by_cross_correlation",
"author": "Bo Kern",
"author_email": "kern@campus.tu-berlin.de",
"download_url": "https://files.pythonhosted.org/packages/82/23/b1ead3a419f7eb99245462925610aac901b1452830cc2d18c8d1bdbc684b/sequence_alignment_by_cross_correlation-0.1.0.tar.gz",
"platform": null,
"description": "<!-- Improved compatibility of back to top link: See: https://github.com/othneildrew/Best-README-Template/pull/73 -->\n<a name=\"readme-top\"></a>\n<!--\n*** Thanks for checking out the Best-README-Template. If you have a suggestion\n*** that would make this better, please fork the repo and create a pull request\n*** or simply open an issue with the tag \"enhancement\".\n*** Don't forget to give the project a star!\n*** Thanks again! Now go create something AMAZING! :D\n-->\n\n\n\n<!-- PROJECT SHIELDS -->\n<!--\n*** I'm using markdown \"reference style\" links for readability.\n*** Reference links are enclosed in brackets [ ] instead of parentheses ( ).\n*** See the bottom of this document for the declaration of the reference variables\n*** for contributors-url, forks-url, etc. This is an optional, concise syntax you may use.\n*** https://www.markdownguide.org/basic-syntax/#reference-style-links\n-->\n[![Contributors][contributors-shield]][contributors-url]\n[![Forks][forks-shield]][forks-url]\n[![Stargazers][stars-shield]][stars-url]\n[![Issues][issues-shield]][issues-url]\n[![MIT License][license-shield]][license-url]\n[![LinkedIn][linkedin-shield]][linkedin-url]\n\n\n\n<!-- PROJECT LOGO -->\n<br />\n<div align=\"center\">\n <a href=\"https://github.com/kuhjuice/sequence_alignment_by_cross_correlation\">\n <img style='border-radius:30px' src=\"images/logo.png\" alt=\"Logo\" width=\"120\" height=\"120\">\n </a>\n\n<h3 align=\"center\">Sequence Alignment<br>by cross correlation</h3>\n\n <p align=\"center\">\n This is an implementation of the cross correlation algorithm for DNA/RNA alignment\n <br />\n <a href=\"https://github.com/kuhjuice/sequence_alignment_by_cross_correlation\"><strong>Explore the docs \u00bb</strong></a>\n <br />\n <br />\n <!-- <a href=\"https://github.com/kuhjuice/sequence_alignment_by_cross_correlation\">View Demo</a>\n \u00b7\n -->\n <a href=\"https://github.com/kuhjuice/sequence_alignment_by_cross_correlation/issues\">Report Bug</a>\n \u00b7\n <a href=\"https://github.com/kuhjuice/sequence_alignment_by_cross_correlation/issues\">Request Feature</a>\n </p>\n</div>\n\n\n\n<!-- TABLE OF CONTENTS -->\n<details>\n <summary>Table of Contents</summary>\n <ol>\n <li>\n <a href=\"#about-the-project\">About The Project</a>\n <ul>\n <li><a href=\"#built-with\">Built With</a></li>\n </ul>\n </li>\n <li>\n <a href=\"#getting-started\">Getting Started</a>\n <ul>\n <li><a href=\"#prerequisites\">Prerequisites</a></li>\n <li><a href=\"#installation\">Installation</a></li>\n </ul>\n </li>\n <li><a href=\"#usage\">Usage</a></li>\n <li><a href=\"#roadmap\">Roadmap</a></li>\n <li><a href=\"#contributing\">Contributing</a></li>\n <li><a href=\"#license\">License</a></li>\n <li><a href=\"#contact\">Contact</a></li>\n <li><a href=\"#acknowledgments\">Acknowledgments</a></li>\n </ol>\n</details>\n\n\n\n<!-- ABOUT THE PROJECT -->\n## About The Project\nThe project is based on the paper [Sequence Alignment by Cross-Correlation](https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2291754/) and bridges the gap between the knowledge and an useful implementation. The underlying technique is the cross correlation algorithm, which can be tested in this [notebook](https://makeabilitylab.github.io/physcomp/signals/ComparingSignals/index.html).\n\nAnother [notebook](https://colab.research.google.com/drive/1XC0AIqli6igxuDt0phcmZCu5IK5tiV7W?usp=sharing) can be seen here. The focus of this notebook is to illustrate how we can use the cross correlation for genomic data.\n\nThe gene sequences were obtained using the [NCBI](https://www.ncbi.nlm.nih.gov/gene/) database.\n\n![Example Screen Shot][product-screenshot]\n\n<!-- Here's a blank template to get started: To avoid retyping too much info. Do a search and replace with your text editor for the following: `kuhjuice`, `sequence_alignment_by_cross_correlation`, `twitter_handle`, `linkedin_username`, `email_client`, `email`, `project_title`, `project_description` -->\n\n<p align=\"right\">(<a href=\"#readme-top\">back to top</a>)</p>\n\n<!-- GETTING STARTED -->\n## Getting Started\n\nThis is an example of how you may give instructions on setting up your project locally.\nTo get a local copy up and running follow these simple example steps.\n\n### Prerequisites\n\nThis is an example of how to list things you need to use the software and how to install them.\n* python3: https://realpython.com/installing-python/\n\n### Installation\n\n1. Clone the repo\n ```sh\n git clone https://github.com/kuhjuice/sequence_alignment_by_cross_correlation.git\n ```\n2. Navigate into the repo\n ```sh\n cd sequence_alignment_by_cross_correlation\n ```\n3. Install requirements.txt\n ```sh\n pip install -r requirements.txt\n ```\n or\n ```sh\n pip3 install -r requirements.txt\n ```\n4. Ask the CLI for help with\n ```sh\n python3 sequence_alignment_by_cross_correlation.py --help\n ```\n\n<p align=\"right\">(<a href=\"#readme-top\">back to top</a>)</p>\n\n\n\n<!-- USAGE EXAMPLES -->\n## Usage\n### Example 1\nIf we want to get an understanding of what the tool can do for us, we can use the help function of the CLI.\n```sh\npython3 sequence_alignment_by_cross_correlation/sequence_alignment_by_cross_correlation.py --help\n```\n![Help Screen Shot][help-screenshot]\n### Example 2\nIf we want to find the gene omcB in the genome of Chlamydia Trachomatis we can use the sequence files in `sequencesToTest`\n\nExecuting the following will search for the omcB Gene in the genome of Chlamydia Trachomatis\n\n ```sh\npython3 sequence_alignment_by_cross_correlation/sequence_alignment_by_cross_correlation.py 'sequencesToTest/C_T_genome.fasta' 'sequencesToTest/omcB_C_T_100fit.fna'\n ```\n\n![Usage Screen Shot][usage-screenshot]\n\n<p align=\"right\">(<a href=\"#readme-top\">back to top</a>)</p>\n\n\n\n<!-- ROADMAP -->\n## Roadmap\n\n- [ ] Fix Bugs\n- [ ] Make it a real package\n- [ ] Evalueate if useful for other projects\n\nSee the [open issues](https://github.com/kuhjuice/sequence_alignment_by_cross_correlation/issues) for a full list of proposed features (and known issues).\n\n<p align=\"right\">(<a href=\"#readme-top\">back to top</a>)</p>\n\n\n\n<!-- CONTRIBUTING -->\n## Contributing\n\nContributions are what make the open source community such an amazing place to learn, inspire, and create. Any contributions you make are **greatly appreciated**.\n\nIf you have a suggestion that would make this better, please fork the repo and create a pull request. You can also simply open an issue with the tag \"enhancement\".\nDon't forget to give the project a star! Thanks again!\n\n1. Fork the Project\n2. Create your Feature Branch (`git checkout -b feature/AmazingFeature`)\n3. Commit your Changes (`git commit -m 'Add some AmazingFeature'`)\n4. Push to the Branch (`git push origin feature/AmazingFeature`)\n5. Open a Pull Request\n\n<p align=\"right\">(<a href=\"#readme-top\">back to top</a>)</p>\n\n\n\n<!-- LICENSE -->\n## License\n\nDistributed under the MIT License. See `LICENSE.txt` for more information.\n\n<p align=\"right\">(<a href=\"#readme-top\">back to top</a>)</p>\n\n\n\n<!-- CONTACT -->\n## Contact\n\nBo Kern - [@blood_in_the_water@chaos.social ](https://chaos.social/@blood_in_the_water) - bo@blackscript.de\n\nProject Link: [https://github.com/kuhjuice/sequence_alignment_by_cross_correlation](https://github.com/kuhjuice/sequence_alignment_by_cross_correlation)\n\n<p align=\"right\">(<a href=\"#readme-top\">back to top</a>)</p>\n\n\n\n<!-- ACKNOWLEDGMENTS -->\n## Acknowledgments\n\n* [TU-Berlin](tu.berlin)\n* [Carmen Regner](https://www.tu.berlin/mikrobiologie/ueber-uns/team-personen/#c422452)\n\n<p align=\"right\">(<a href=\"#readme-top\">back to top</a>)</p>\n\n\n\n<!-- MARKDOWN LINKS & IMAGES -->\n<!-- https://www.markdownguide.org/basic-syntax/#reference-style-links -->\n[contributors-shield]: https://img.shields.io/github/contributors/kuhjuice/sequence_alignment_by_cross_correlation.svg?style=for-the-badge\n[contributors-url]: https://github.com/kuhjuice/sequence_alignment_by_cross_correlation/graphs/contributors\n[forks-shield]: https://img.shields.io/github/forks/kuhjuice/sequence_alignment_by_cross_correlation.svg?style=for-the-badge\n[forks-url]: https://github.com/kuhjuice/sequence_alignment_by_cross_correlation/network/members\n[stars-shield]: https://img.shields.io/github/stars/kuhjuice/sequence_alignment_by_cross_correlation.svg?style=for-the-badge\n[stars-url]: https://github.com/kuhjuice/sequence_alignment_by_cross_correlation/stargazers\n[issues-shield]: https://img.shields.io/github/issues/kuhjuice/sequence_alignment_by_cross_correlation.svg?style=for-the-badge\n[issues-url]: https://github.com/kuhjuice/sequence_alignment_by_cross_correlation/issues\n[license-shield]: https://img.shields.io/github/license/kuhjuice/sequence_alignment_by_cross_correlation.svg?style=for-the-badge\n[license-url]: https://github.com/kuhjuice/sequence_alignment_by_cross_correlation/blob/master/LICENSE.txt\n[linkedin-shield]: https://img.shields.io/badge/-LinkedIn-black.svg?style=for-the-badge&logo=linkedin&colorB=555\n[linkedin-url]: https://linkedin.com/in/bpbk\n[product-screenshot]: images/productScreenshot.png\n[usage-screenshot]: images/usagescreenshot.png\n[help-screenshot]: images/helpScreenshot.png\n[Next.js]: https://img.shields.io/badge/next.js-000000?style=for-the-badge&logo=nextdotjs&logoColor=white\n[Next-url]: https://nextjs.org/\n[React.js]: https://img.shields.io/badge/React-20232A?style=for-the-badge&logo=react&logoColor=61DAFB\n[React-url]: https://reactjs.org/\n[Vue.js]: https://img.shields.io/badge/Vue.js-35495E?style=for-the-badge&logo=vuedotjs&logoColor=4FC08D\n[Vue-url]: https://vuejs.org/\n[Angular.io]: https://img.shields.io/badge/Angular-DD0031?style=for-the-badge&logo=angular&logoColor=white\n[Angular-url]: https://angular.io/\n[Svelte.dev]: https://img.shields.io/badge/Svelte-4A4A55?style=for-the-badge&logo=svelte&logoColor=FF3E00\n[Svelte-url]: https://svelte.dev/\n[Laravel.com]: https://img.shields.io/badge/Laravel-FF2D20?style=for-the-badge&logo=laravel&logoColor=white\n[Laravel-url]: https://laravel.com\n[Bootstrap.com]: https://img.shields.io/badge/Bootstrap-563D7C?style=for-the-badge&logo=bootstrap&logoColor=white\n[Bootstrap-url]: https://getbootstrap.com\n[JQuery.com]: https://img.shields.io/badge/jQuery-0769AD?style=for-the-badge&logo=jquery&logoColor=white\n[JQuery-url]: https://jquery.com \n",
"bugtrack_url": null,
"license": "MIT license",
"summary": "An implementation of sequence alignment on the basis of cross-correlation technique",
"version": "0.1.0",
"split_keywords": [
"sequence_alignment_by_cross_correlation"
],
"urls": [
{
"comment_text": "",
"digests": {
"md5": "c1658a194b52de729954fb7c8dbf9737",
"sha256": "6101ecd6f43f48f1068c5cc3393787c70049e79b434ce6d3619221d47aceb973"
},
"downloads": -1,
"filename": "sequence_alignment_by_cross_correlation-0.1.0-py2.py3-none-any.whl",
"has_sig": false,
"md5_digest": "c1658a194b52de729954fb7c8dbf9737",
"packagetype": "bdist_wheel",
"python_version": "py2.py3",
"requires_python": ">=3.6",
"size": 11252,
"upload_time": "2022-12-25T02:34:40",
"upload_time_iso_8601": "2022-12-25T02:34:40.854222Z",
"url": "https://files.pythonhosted.org/packages/23/1e/9b02e7fa2375b1d23ff8bb0e21586a676cba24e3b7009e6105dfb882f954/sequence_alignment_by_cross_correlation-0.1.0-py2.py3-none-any.whl",
"yanked": false,
"yanked_reason": null
},
{
"comment_text": "",
"digests": {
"md5": "685b241d1d39b970e992a570ea15677e",
"sha256": "292ca1505e32e01dd14b9d9bc38190e28313b1660071bbdc956a532ebc76459f"
},
"downloads": -1,
"filename": "sequence_alignment_by_cross_correlation-0.1.0.tar.gz",
"has_sig": false,
"md5_digest": "685b241d1d39b970e992a570ea15677e",
"packagetype": "sdist",
"python_version": "source",
"requires_python": ">=3.6",
"size": 20053,
"upload_time": "2022-12-25T02:34:43",
"upload_time_iso_8601": "2022-12-25T02:34:43.067867Z",
"url": "https://files.pythonhosted.org/packages/82/23/b1ead3a419f7eb99245462925610aac901b1452830cc2d18c8d1bdbc684b/sequence_alignment_by_cross_correlation-0.1.0.tar.gz",
"yanked": false,
"yanked_reason": null
}
],
"upload_time": "2022-12-25 02:34:43",
"github": true,
"gitlab": false,
"bitbucket": false,
"github_user": "kuhjuice",
"github_project": "sequence_alignment_by_cross_correlation",
"travis_ci": true,
"coveralls": false,
"github_actions": false,
"requirements": [],
"tox": true,
"lcname": "sequence-alignment-by-cross-correlation"
}
JSON
