symetrics


Namesymetrics JSON
Version 13.0.0 PyPI version JSON
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home_pagehttps://lbundalian.github.io/symetrics/
SummarySymetrics API
upload_time2024-05-25 14:44:57
maintainerNone
docs_urlNone
authorLinnaeus Bundalian
requires_pythonNone
licenseNone
keywords python synonymous variants
VCS
bugtrack_url
requirements No requirements were recorded.
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coveralls test coverage No coveralls.
            A package to access SYMETRICS database. 
SYMETRICS database is a consolidation of metrics for synonymous variants which were derived from a number of computational tools each of which contributing to 
attribute specific metrics such as SYNVEP for general functional constraints, SpliceAI for splicing effect, SILVA for obtaining GERP++ (phylogenetic related constraints)
CpG/CpG_Exon, dRSCU/RSCU for codon usage and SURF for rna stability. The package also includes a result of the analysis of the influence of each variants exceeding set threshold
per metrics defined constituting to a score assigned to a gene

            

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