torchio


Nametorchio JSON
Version 0.19.6 PyPI version JSON
download
home_pagehttp://torchio.rtfd.io
SummaryTools for medical image processing with PyTorch
upload_time2024-02-19 23:13:42
maintainerFernando Perez-Garcia
docs_urlNone
authorTorchIO contributors
requires_python<3.13,>=3.8
licenseApache-2.0
keywords medical image processing pytorch augmentation mri
VCS
bugtrack_url
requirements No requirements were recorded.
Travis-CI No Travis.
coveralls test coverage No coveralls. 
            <!-- markdownlint-disable -->
<p align="center">
  <a href="http://torchio.rtfd.io/">
    <img src="https://raw.githubusercontent.com/fepegar/torchio/main/docs/source/favicon_io/for_readme_2000x462.png" alt="TorchIO logo">
  </a>
</p>
<!-- markdownlint-restore -->

> *Tools like TorchIO are a symptom of the maturation of medical AI research using deep learning techniques*.

Jack Clark, Policy Director
at [OpenAI](https://openai.com/) ([link](https://jack-clark.net/2020/03/17/)).

---

<!-- markdownlint-disable -->
<table align="center">
    <tr>
        <td align="left">
            <b>Package</b>
        </td>
        <td align="center">
            <a href="https://pypi.org/project/torchio/">
                <img src="https://img.shields.io/pypi/dm/torchio.svg?label=PyPI%20downloads&logo=python&logoColor=white" alt="PyPI downloads">
            </a>
            <a href="https://pypi.org/project/torchio/">
                <img src="https://img.shields.io/pypi/v/torchio?label=PyPI%20version&logo=python&logoColor=white" alt="PyPI version">
            </a>
            <a href="https://anaconda.org/conda-forge/torchio">
                <img src="https://img.shields.io/conda/v/conda-forge/torchio.svg?label=conda-forge&logo=conda-forge" alt="Conda version">
            </a>
        </td>
    </tr>
    <tr>
        <td align="left">
            <b>CI</b>
        </td>
        <td align="center">
            <a href="https://github.com/fepegar/torchio/actions/workflows/tests.yml">
                <img src="https://github.com/fepegar/torchio/actions/workflows/tests.yml/badge.svg" alt="Tests status">
            </a>
            <a href="https://torchio.rtfd.io/?badge=latest">
                <img src="https://img.shields.io/readthedocs/torchio?label=Docs&logo=Read%20the%20Docs" alt="Documentation status">
            </a>
            <a href="https://codecov.io/github/fepegar/torchio">
                <img src="https://codecov.io/gh/fepegar/torchio/branch/main/graphs/badge.svg" alt="Coverage status">
            </a>
        </td>
    </tr>
    <tr>
        <td align="left">
            <b>Code</b>
        </td>
        <td align="center">
            <a href="https://github.com/psf/black">
                <img src="https://img.shields.io/badge/code%20style-black-000000.svg" alt="Code quality">
            </a>
            <a href="https://scrutinizer-ci.com/g/fepegar/torchio/?branch=main">
                <img src="https://img.shields.io/scrutinizer/g/fepegar/torchio.svg?label=Code%20quality&logo=scrutinizer" alt="Code quality">
            </a>
            <a href="https://codeclimate.com/github/fepegar/torchio/maintainability">
                <img src="https://api.codeclimate.com/v1/badges/518673e49a472dd5714d/maintainability" alt="Code maintainability">
            </a>
            <a href="https://github.com/pre-commit/pre-commit">
                <img src="https://img.shields.io/badge/pre--commit-enabled-brightgreen?logo=pre-commit&logoColor=white" alt="pre-commit">
            </a>
        </td>
    </tr>
    <tr>
        <td align="left">
            <b>Tutorials</b>
        </td>
        <td align="center">
            <a href="https://github.com/fepegar/torchio/blob/main/tutorials/README.md">
                <img src="https://colab.research.google.com/assets/colab-badge.svg" alt="Google Colab">
            </a>
        </td>
    </tr>
    <tr>
        <td align="left">
            <b>Community</b>
        </td>
        <td align="center">
            <a href="https://join.slack.com/t/torchioworkspace/shared_invite/zt-exgpd5rm-BTpxg2MazwiiMDw7X9xMFg">
                <img src="https://img.shields.io/badge/TorchIO-Join%20on%20Slack-blueviolet?style=flat&logo=slack" alt="Slack">
            </a>
            <a href="https://twitter.com/TorchIOLib">
                <img src="https://img.shields.io/twitter/url/https/twitter.com/TorchIOLib.svg?style=social&label=Follow%20%40TorchIOLib" alt="Twitter">
            </a>
            <a href="https://twitter.com/TorchIO_commits">
                <img src="https://img.shields.io/twitter/url/https/twitter.com/TorchIO_commits.svg?style=social&label=Follow%20%40TorchIO_commits" alt="Twitter">
            </a>
            <a href="https://www.youtube.com/watch?v=UEUVSw5-M9M">
                <img src="https://img.shields.io/youtube/views/UEUVSw5-M9M?label=watch&style=social" alt="YouTube">
            </a>
        </td>
    </tr>
</table>

---

<p align="center">
  <a href="https://torchio.readthedocs.io/transforms/augmentation.html">
    <img style="width: 600px; overflow: hidden;" src="https://raw.githubusercontent.com/fepegar/torchio/main/docs/images/fpg_progressive.gif" alt="Progressive artifacts">
  </a>
</p>

<p align="center">
  <a href="https://torchio.readthedocs.io/transforms/augmentation.html">
    <img style="width: 360px; height: 360px; overflow: hidden;" src="https://raw.githubusercontent.com/fepegar/torchio/main/docs/images/augmentation.gif" alt="Augmentation">
  </a>
</p>

---

<table align="center">
    <tr>
        <td align="center">Original</td>
        <td align="center">
            <a href="http://torchio.rtfd.io/transforms/augmentation.html#randomblur">Random blur</a>
        </td>
    </tr>
    <tr>
        <td align="center"><img src="https://raw.githubusercontent.com/fepegar/torchio/main/docs/images/gifs_readme/1_Lambda_mri.png" alt="Original"></td>
        <td align="center">
            <a href="http://torchio.rtfd.io/transforms/augmentation.html#randomblur">
                <img src="https://raw.githubusercontent.com/fepegar/torchio/main/docs/images/gifs_readme/2_RandomBlur_mri.gif" alt="Random blur">
            </a>
        </td>
    </tr>
    <tr>
        <td align="center">
            <a href="http://torchio.rtfd.io/transforms/augmentation.html#randomflip">Random flip</a>
        </td>
        <td align="center">
            <a href="http://torchio.rtfd.io/transforms/augmentation.html#randomnoise">Random noise</a>
        </td>
    </tr>
    <tr>
        <td align="center">
            <a href="http://torchio.rtfd.io/transforms/augmentation.html#randomflip">
                <img src="https://raw.githubusercontent.com/fepegar/torchio/main/docs/images/gifs_readme/3_RandomFlip_mri.gif" alt="Random flip">
            </a>
        </td>
        <td align="center">
            <a href="http://torchio.rtfd.io/transforms/augmentation.html#randomnoise">
                <img src="https://raw.githubusercontent.com/fepegar/torchio/main/docs/images/gifs_readme/4_Compose_mri.gif" alt="Random noise">
            </a>
        </td>
    </tr>
    <tr>
        <td align="center">
            <a href="http://torchio.rtfd.io/transforms/augmentation.html#randomaffine">Random affine transformation</a>
        </td>
        <td align="center">
            <a href="http://torchio.rtfd.io/transforms/augmentation.html#randomelasticdeformation">Random elastic transformation</a>
        </td>
    </tr>
    <tr>
        <td align="center">
            <a href="http://torchio.rtfd.io/transforms/augmentation.html#randomaffine">
                <img src="https://raw.githubusercontent.com/fepegar/torchio/main/docs/images/gifs_readme/5_RandomAffine_mri.gif" alt="Random affine transformation">
            </a>
        </td>
        <td align="center">
            <a href="http://torchio.rtfd.io/transforms/augmentation.html#randomelasticdeformation">
                <img src="https://raw.githubusercontent.com/fepegar/torchio/main/docs/images/gifs_readme/6_RandomElasticDeformation_mri.gif" alt="Random elastic transformation">
            </a>
        </td>
    </tr>
    <tr>
        <td align="center">
            <a href="http://torchio.rtfd.io/transforms/augmentation.html#randombiasfield">Random bias field artifact</a>
        </td>
        <td align="center">
            <a href="http://torchio.rtfd.io/transforms/augmentation.html#randommotion">Random motion artifact</a>
        </td>
    </tr>
    <tr>
        <td align="center">
            <a href="http://torchio.rtfd.io/transforms/augmentation.html#randombiasfield">
                <img src="https://raw.githubusercontent.com/fepegar/torchio/main/docs/images/gifs_readme/7_RandomBiasField_mri.gif" alt="Random bias field artifact">
            </a>
        </td>
        <td align="center">
            <a href="http://torchio.rtfd.io/transforms/augmentation.html#randommotion">
                <img src="https://raw.githubusercontent.com/fepegar/torchio/main/docs/images/gifs_readme/8_RandomMotion_mri.gif" alt="Random motion artifact">
            </a>
        </td>
    </tr>
    <tr>
        <td align="center">
            <a href="http://torchio.rtfd.io/transforms/augmentation.html#randomspike">Random spike artifact</a>
        </td>
        <td align="center">
            <a href="http://torchio.rtfd.io/transforms/augmentation.html#randomghosting">Random ghosting artifact</a>
        </td>
    </tr>
    <tr>
        <td align="center">
            <a href="http://torchio.rtfd.io/transforms/augmentation.html#randomspike">
                <img src="https://raw.githubusercontent.com/fepegar/torchio/main/docs/images/gifs_readme/9_RandomSpike_mri.gif" alt="Random spike artifact">
            </a>
        </td>
        <td align="center">
            <a href="http://torchio.rtfd.io/transforms/augmentation.html#randomghosting">
                <img src="https://raw.githubusercontent.com/fepegar/torchio/main/docs/images/gifs_readme/10_RandomGhosting_mri.gif" alt="Random ghosting artifact">
            </a>
        </td>
    </tr>
</table>

---

<p align="center">
  <a href="https://torchio.readthedocs.io/patches/patch_training.html#queue">
    <img style="width: 640px; height: 360px; overflow: hidden;" src="https://raw.githubusercontent.com/fepegar/torchio/main/docs/images/queue.gif" alt="Queue">
  </a>
</p>

([Queue](https://torchio.readthedocs.io/patches/patch_training.html#queue)
for [patch-based training](https://torchio.readthedocs.io/patches/index.html))

<!-- markdownlint-restore -->

---

TorchIO is a Python package containing a set of tools to efficiently
read, preprocess, sample, augment, and write 3D medical images in deep learning applications
written in [PyTorch](https://pytorch.org/),
including intensity and spatial transforms
for data augmentation and preprocessing.
Transforms include typical computer vision operations
such as random affine transformations and also domain-specific ones such as
simulation of intensity artifacts due to
[MRI magnetic field inhomogeneity](https://mriquestions.com/why-homogeneity.html)
or [k-space motion artifacts](http://proceedings.mlr.press/v102/shaw19a.html).

This package has been greatly inspired by NiftyNet,
[which is not actively maintained anymore](https://github.com/NifTK/NiftyNet/commit/935bf4334cd00fa9f9d50f6a95ddcbfdde4031e0).

## Credits

If you like this repository, please click on Star!

If you use this package for your research, please cite our paper:

[F. Pérez-García, R. Sparks, and S. Ourselin. *TorchIO: a Python library for efficient loading, preprocessing, augmentation and patch-based sampling of medical images in deep learning*. Computer Methods and Programs in Biomedicine (June 2021), p. 106236. ISSN: 0169-2607.doi:10.1016/j.cmpb.2021.106236.](https://doi.org/10.1016/j.cmpb.2021.106236)

BibTeX entry:

```bibtex
@article{perez-garcia_torchio_2021,
    title = {TorchIO: a Python library for efficient loading, preprocessing, augmentation and patch-based sampling of medical images in deep learning},
    journal = {Computer Methods and Programs in Biomedicine},
    pages = {106236},
    year = {2021},
    issn = {0169-2607},
    doi = {https://doi.org/10.1016/j.cmpb.2021.106236},
    url = {https://www.sciencedirect.com/science/article/pii/S0169260721003102},
    author = {P{\'e}rez-Garc{\'i}a, Fernando and Sparks, Rachel and Ourselin, S{\'e}bastien},
}
```

This project is supported by the following institutions:

- [Engineering and Physical Sciences Research Council (EPSRC) & UK Research and Innovation (UKRI)](https://epsrc.ukri.org/)
- [EPSRC Centre for Doctoral Training in Intelligent, Integrated Imaging In Healthcare (i4health)](https://www.ucl.ac.uk/intelligent-imaging-healthcare/) (University College London)
- [Wellcome / EPSRC Centre for Interventional and Surgical Sciences (WEISS)](https://www.ucl.ac.uk/interventional-surgical-sciences/) (University College London)
- [School of Biomedical Engineering & Imaging Sciences (BMEIS)](https://www.kcl.ac.uk/bmeis) (King's College London)

## Getting started

See [Getting started](https://torchio.readthedocs.io/quickstart.html) for
[installation](https://torchio.readthedocs.io/quickstart.html#installation)
instructions
and a [Hello, World!](https://torchio.readthedocs.io/quickstart.html#hello-world)
example.

Longer usage examples can be found in the
[tutorials](https://github.com/fepegar/torchio/blob/main/tutorials/README.md).

All the documentation is hosted on
[Read the Docs](http://torchio.rtfd.io/).

Please
[open a new issue](https://github.com/fepegar/torchio/issues/new/choose)
if you think something is missing.

## Contributors

Thanks goes to all these people ([emoji key](https://allcontributors.org/docs/en/emoji-key)):

<!-- ALL-CONTRIBUTORS-LIST:START - Do not remove or modify this section -->
<!-- prettier-ignore-start -->
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<table>
  <tbody>
    <tr>
      <td align="center" valign="top" width="14.28%"><a href="https://github.com/fepegar"><img src="https://avatars1.githubusercontent.com/u/12688084?v=4?s=100" width="100px;" alt="Fernando Pérez-García"/><br /><sub><b>Fernando Pérez-García</b></sub></a><br /><a href="https://github.com/fepegar/torchio/commits?author=fepegar" title="Code">💻</a> <a href="https://github.com/fepegar/torchio/commits?author=fepegar" title="Documentation">📖</a></td>
      <td align="center" valign="top" width="14.28%"><a href="https://github.com/romainVala"><img src="https://avatars1.githubusercontent.com/u/5611962?v=4?s=100" width="100px;" alt="valabregue"/><br /><sub><b>valabregue</b></sub></a><br /><a href="#ideas-romainVala" title="Ideas, Planning, & Feedback">🤔</a> <a href="https://github.com/fepegar/torchio/pulls?q=is%3Apr+reviewed-by%3AromainVala" title="Reviewed Pull Requests">👀</a> <a href="https://github.com/fepegar/torchio/commits?author=romainVala" title="Code">💻</a> <a href="#question-romainVala" title="Answering Questions">💬</a> <a href="https://github.com/fepegar/torchio/issues?q=author%3AromainVala" title="Bug reports">🐛</a></td>
      <td align="center" valign="top" width="14.28%"><a href="https://github.com/GFabien"><img src="https://avatars1.githubusercontent.com/u/39873986?v=4?s=100" width="100px;" alt="GFabien"/><br /><sub><b>GFabien</b></sub></a><br /><a href="https://github.com/fepegar/torchio/commits?author=GFabien" title="Code">💻</a> <a href="https://github.com/fepegar/torchio/pulls?q=is%3Apr+reviewed-by%3AGFabien" title="Reviewed Pull Requests">👀</a> <a href="#ideas-GFabien" title="Ideas, Planning, & Feedback">🤔</a></td>
      <td align="center" valign="top" width="14.28%"><a href="https://github.com/GReguig"><img src="https://avatars1.githubusercontent.com/u/11228281?v=4?s=100" width="100px;" alt="G.Reguig"/><br /><sub><b>G.Reguig</b></sub></a><br /><a href="https://github.com/fepegar/torchio/commits?author=GReguig" title="Code">💻</a></td>
      <td align="center" valign="top" width="14.28%"><a href="https://github.com/nwschurink"><img src="https://avatars3.githubusercontent.com/u/12720130?v=4?s=100" width="100px;" alt="Niels Schurink"/><br /><sub><b>Niels Schurink</b></sub></a><br /><a href="https://github.com/fepegar/torchio/commits?author=nwschurink" title="Code">💻</a></td>
      <td align="center" valign="top" width="14.28%"><a href="https://www.linkedin.com/in/ibrhad/ "><img src="https://avatars3.githubusercontent.com/u/18015788?v=4?s=100" width="100px;" alt="Ibrahim Hadzic"/><br /><sub><b>Ibrahim Hadzic</b></sub></a><br /><a href="https://github.com/fepegar/torchio/issues?q=author%3Aibro45" title="Bug reports">🐛</a></td>
      <td align="center" valign="top" width="14.28%"><a href="https://github.com/ReubenDo"><img src="https://avatars1.githubusercontent.com/u/17268715?v=4?s=100" width="100px;" alt="ReubenDo"/><br /><sub><b>ReubenDo</b></sub></a><br /><a href="#ideas-ReubenDo" title="Ideas, Planning, & Feedback">🤔</a></td>
    </tr>
    <tr>
      <td align="center" valign="top" width="14.28%"><a href="http://julianklug.com"><img src="https://avatars0.githubusercontent.com/u/8020367?v=4?s=100" width="100px;" alt="Julian Klug"/><br /><sub><b>Julian Klug</b></sub></a><br /><a href="#ideas-MonsieurWave" title="Ideas, Planning, & Feedback">🤔</a></td>
      <td align="center" valign="top" width="14.28%"><a href="https://github.com/dvolgyes"><img src="https://avatars1.githubusercontent.com/u/425560?v=4?s=100" width="100px;" alt="David Völgyes"/><br /><sub><b>David Völgyes</b></sub></a><br /><a href="#ideas-dvolgyes" title="Ideas, Planning, & Feedback">🤔</a> <a href="https://github.com/fepegar/torchio/commits?author=dvolgyes" title="Code">💻</a></td>
      <td align="center" valign="top" width="14.28%"><a href="https://www.linkedin.com/in/jfillionr/"><img src="https://avatars0.githubusercontent.com/u/219043?v=4?s=100" width="100px;" alt="Jean-Christophe Fillion-Robin"/><br /><sub><b>Jean-Christophe Fillion-Robin</b></sub></a><br /><a href="https://github.com/fepegar/torchio/commits?author=jcfr" title="Documentation">📖</a></td>
      <td align="center" valign="top" width="14.28%"><a href="http://surajpai.tech"><img src="https://avatars1.githubusercontent.com/u/10467804?v=4?s=100" width="100px;" alt="Suraj Pai"/><br /><sub><b>Suraj Pai</b></sub></a><br /><a href="#ideas-surajpaib" title="Ideas, Planning, & Feedback">🤔</a></td>
      <td align="center" valign="top" width="14.28%"><a href="https://github.com/bcdarwin"><img src="https://avatars2.githubusercontent.com/u/164148?v=4?s=100" width="100px;" alt="Ben Darwin"/><br /><sub><b>Ben Darwin</b></sub></a><br /><a href="#ideas-bcdarwin" title="Ideas, Planning, & Feedback">🤔</a></td>
      <td align="center" valign="top" width="14.28%"><a href="https://github.com/OeslleLucena"><img src="https://avatars0.githubusercontent.com/u/19919194?v=4?s=100" width="100px;" alt="Oeslle Lucena"/><br /><sub><b>Oeslle Lucena</b></sub></a><br /><a href="https://github.com/fepegar/torchio/issues?q=author%3AOeslleLucena" title="Bug reports">🐛</a></td>
      <td align="center" valign="top" width="14.28%"><a href="http://www.soumick.com"><img src="https://avatars0.githubusercontent.com/u/20525305?v=4?s=100" width="100px;" alt="Soumick Chatterjee"/><br /><sub><b>Soumick Chatterjee</b></sub></a><br /><a href="https://github.com/fepegar/torchio/commits?author=soumickmj" title="Code">💻</a></td>
    </tr>
    <tr>
      <td align="center" valign="top" width="14.28%"><a href="https://github.com/neuronflow"><img src="https://avatars1.githubusercontent.com/u/7048826?v=4?s=100" width="100px;" alt="neuronflow"/><br /><sub><b>neuronflow</b></sub></a><br /><a href="https://github.com/fepegar/torchio/commits?author=neuronflow" title="Documentation">📖</a></td>
      <td align="center" valign="top" width="14.28%"><a href="https://github.com/jwitos"><img src="https://avatars2.githubusercontent.com/u/948674?v=4?s=100" width="100px;" alt="Jan Witowski"/><br /><sub><b>Jan Witowski</b></sub></a><br /><a href="https://github.com/fepegar/torchio/commits?author=jwitos" title="Documentation">📖</a></td>
      <td align="center" valign="top" width="14.28%"><a href="https://github.com/dmus"><img src="https://avatars1.githubusercontent.com/u/464378?v=4?s=100" width="100px;" alt="Derk Mus"/><br /><sub><b>Derk Mus</b></sub></a><br /><a href="https://github.com/fepegar/torchio/commits?author=dmus" title="Documentation">📖</a> <a href="https://github.com/fepegar/torchio/commits?author=dmus" title="Code">💻</a> <a href="https://github.com/fepegar/torchio/issues?q=author%3Admus" title="Bug reports">🐛</a></td>
      <td align="center" valign="top" width="14.28%"><a href="http://www.linkedin.com/in/che85"><img src="https://avatars2.githubusercontent.com/u/10195822?v=4?s=100" width="100px;" alt="Christian Herz"/><br /><sub><b>Christian Herz</b></sub></a><br /><a href="https://github.com/fepegar/torchio/issues?q=author%3Ache85" title="Bug reports">🐛</a></td>
      <td align="center" valign="top" width="14.28%"><a href="https://github.com/efirdc"><img src="https://avatars3.githubusercontent.com/u/5416313?v=4?s=100" width="100px;" alt="Cory Efird"/><br /><sub><b>Cory Efird</b></sub></a><br /><a href="https://github.com/fepegar/torchio/commits?author=efirdc" title="Code">💻</a> <a href="https://github.com/fepegar/torchio/issues?q=author%3Aefirdc" title="Bug reports">🐛</a></td>
      <td align="center" valign="top" width="14.28%"><a href="https://github.com/estebvac"><img src="https://avatars.githubusercontent.com/u/21016728?v=4?s=100" width="100px;" alt="Esteban Vaca C."/><br /><sub><b>Esteban Vaca C.</b></sub></a><br /><a href="https://github.com/fepegar/torchio/issues?q=author%3Aestebvac" title="Bug reports">🐛</a></td>
      <td align="center" valign="top" width="14.28%"><a href="https://stackoverflow.com/users/3250829/rayryeng?tab=profile"><img src="https://avatars.githubusercontent.com/u/765375?v=4?s=100" width="100px;" alt="Ray Phan"/><br /><sub><b>Ray Phan</b></sub></a><br /><a href="https://github.com/fepegar/torchio/issues?q=author%3Arayryeng" title="Bug reports">🐛</a></td>
    </tr>
    <tr>
      <td align="center" valign="top" width="14.28%"><a href="https://github.com/Linardos"><img src="https://avatars.githubusercontent.com/u/26694607?v=4?s=100" width="100px;" alt="Akis Linardos"/><br /><sub><b>Akis Linardos</b></sub></a><br /><a href="https://github.com/fepegar/torchio/issues?q=author%3ALinardos" title="Bug reports">🐛</a> <a href="https://github.com/fepegar/torchio/commits?author=Linardos" title="Code">💻</a></td>
      <td align="center" valign="top" width="14.28%"><a href="http://nina.brown.15@ucl.ac.uk"><img src="https://avatars.githubusercontent.com/u/56116848?v=4?s=100" width="100px;" alt="Nina Montana-Brown"/><br /><sub><b>Nina Montana-Brown</b></sub></a><br /><a href="https://github.com/fepegar/torchio/commits?author=NMontanaBrown" title="Documentation">📖</a> <a href="#infra-NMontanaBrown" title="Infrastructure (Hosting, Build-Tools, etc)">🚇</a></td>
      <td align="center" valign="top" width="14.28%"><a href="https://github.com/fabien-brulport"><img src="https://avatars.githubusercontent.com/u/32873392?v=4?s=100" width="100px;" alt="fabien-brulport"/><br /><sub><b>fabien-brulport</b></sub></a><br /><a href="https://github.com/fepegar/torchio/issues?q=author%3Afabien-brulport" title="Bug reports">🐛</a></td>
      <td align="center" valign="top" width="14.28%"><a href="https://github.com/malteekj"><img src="https://avatars.githubusercontent.com/u/44469884?v=4?s=100" width="100px;" alt="malteekj"/><br /><sub><b>malteekj</b></sub></a><br /><a href="https://github.com/fepegar/torchio/issues?q=author%3Amalteekj" title="Bug reports">🐛</a></td>
      <td align="center" valign="top" width="14.28%"><a href="https://github.com/diazandr3s"><img src="https://avatars.githubusercontent.com/u/11991079?v=4?s=100" width="100px;" alt="Andres Diaz-Pinto"/><br /><sub><b>Andres Diaz-Pinto</b></sub></a><br /><a href="https://github.com/fepegar/torchio/issues?q=author%3Adiazandr3s" title="Bug reports">🐛</a></td>
      <td align="center" valign="top" width="14.28%"><a href="http://www.cbica.upenn.edu/spati"><img src="https://avatars.githubusercontent.com/u/11719673?v=4?s=100" width="100px;" alt="Sarthak Pati"/><br /><sub><b>Sarthak Pati</b></sub></a><br /><a href="#platform-sarthakpati" title="Packaging/porting to new platform">📦</a> <a href="https://github.com/fepegar/torchio/commits?author=sarthakpati" title="Documentation">📖</a></td>
      <td align="center" valign="top" width="14.28%"><a href="https://github.com/GabriellaKamlish"><img src="https://avatars.githubusercontent.com/u/26881445?v=4?s=100" width="100px;" alt="GabriellaKamlish"/><br /><sub><b>GabriellaKamlish</b></sub></a><br /><a href="https://github.com/fepegar/torchio/issues?q=author%3AGabriellaKamlish" title="Bug reports">🐛</a></td>
    </tr>
    <tr>
      <td align="center" valign="top" width="14.28%"><a href="https://github.com/TylerSpears"><img src="https://avatars.githubusercontent.com/u/7096950?v=4?s=100" width="100px;" alt="Tyler Spears"/><br /><sub><b>Tyler Spears</b></sub></a><br /><a href="https://github.com/fepegar/torchio/issues?q=author%3ATylerSpears" title="Bug reports">🐛</a></td>
      <td align="center" valign="top" width="14.28%"><a href="http://dagut.ru"><img src="https://avatars.githubusercontent.com/u/7759336?v=4?s=100" width="100px;" alt="DaGuT"/><br /><sub><b>DaGuT</b></sub></a><br /><a href="https://github.com/fepegar/torchio/commits?author=DaGuT" title="Documentation">📖</a></td>
      <td align="center" valign="top" width="14.28%"><a href="https://github.com/hsiangyuzhao"><img src="https://avatars.githubusercontent.com/u/53631393?v=4?s=100" width="100px;" alt="Xiangyu Zhao"/><br /><sub><b>Xiangyu Zhao</b></sub></a><br /><a href="https://github.com/fepegar/torchio/issues?q=author%3Ahsiangyuzhao" title="Bug reports">🐛</a></td>
      <td align="center" valign="top" width="14.28%"><a href="https://siahuat0727.github.io"><img src="https://avatars.githubusercontent.com/u/17688111?v=4?s=100" width="100px;" alt="siahuat0727"/><br /><sub><b>siahuat0727</b></sub></a><br /><a href="https://github.com/fepegar/torchio/commits?author=siahuat0727" title="Documentation">📖</a> <a href="https://github.com/fepegar/torchio/issues?q=author%3Asiahuat0727" title="Bug reports">🐛</a></td>
      <td align="center" valign="top" width="14.28%"><a href="https://github.com/Svdvoort"><img src="https://avatars.githubusercontent.com/u/23049683?v=4?s=100" width="100px;" alt="Svdvoort"/><br /><sub><b>Svdvoort</b></sub></a><br /><a href="https://github.com/fepegar/torchio/commits?author=Svdvoort" title="Code">💻</a></td>
      <td align="center" valign="top" width="14.28%"><a href="https://www.linkedin.com/in/alban-steff-260ab715b/"><img src="https://avatars.githubusercontent.com/u/59876036?v=4?s=100" width="100px;" alt="Albans98"/><br /><sub><b>Albans98</b></sub></a><br /><a href="https://github.com/fepegar/torchio/commits?author=Albans98" title="Code">💻</a></td>
      <td align="center" valign="top" width="14.28%"><a href="https://mattwarkentin.github.io/"><img src="https://avatars.githubusercontent.com/u/27825069?v=4?s=100" width="100px;" alt="Matthew T. Warkentin"/><br /><sub><b>Matthew T. Warkentin</b></sub></a><br /><a href="https://github.com/fepegar/torchio/commits?author=mattwarkentin" title="Code">💻</a></td>
    </tr>
    <tr>
      <td align="center" valign="top" width="14.28%"><a href="https://github.com/glupol"><img src="https://avatars.githubusercontent.com/u/57905234?v=4?s=100" width="100px;" alt="glupol"/><br /><sub><b>glupol</b></sub></a><br /><a href="https://github.com/fepegar/torchio/issues?q=author%3Aglupol" title="Bug reports">🐛</a></td>
      <td align="center" valign="top" width="14.28%"><a href="https://github.com/ramonemiliani93"><img src="https://avatars.githubusercontent.com/u/14314888?v=4?s=100" width="100px;" alt="ramonemiliani93"/><br /><sub><b>ramonemiliani93</b></sub></a><br /><a href="https://github.com/fepegar/torchio/commits?author=ramonemiliani93" title="Documentation">📖</a> <a href="https://github.com/fepegar/torchio/issues?q=author%3Aramonemiliani93" title="Bug reports">🐛</a> <a href="https://github.com/fepegar/torchio/commits?author=ramonemiliani93" title="Code">💻</a></td>
      <td align="center" valign="top" width="14.28%"><a href="https://github.com/justusschock"><img src="https://avatars.githubusercontent.com/u/12886177?v=4?s=100" width="100px;" alt="Justus Schock"/><br /><sub><b>Justus Schock</b></sub></a><br /><a href="https://github.com/fepegar/torchio/commits?author=justusschock" title="Code">💻</a> <a href="https://github.com/fepegar/torchio/issues?q=author%3Ajustusschock" title="Bug reports">🐛</a> <a href="#ideas-justusschock" title="Ideas, Planning, & Feedback">🤔</a> <a href="https://github.com/fepegar/torchio/pulls?q=is%3Apr+reviewed-by%3Ajustusschock" title="Reviewed Pull Requests">👀</a></td>
      <td align="center" valign="top" width="14.28%"><a href="https://github.com/cepa995"><img src="https://avatars.githubusercontent.com/u/67524891?v=4?s=100" width="100px;" alt="Stefan Milorad Radonjić"/><br /><sub><b>Stefan Milorad Radonjić</b></sub></a><br /><a href="https://github.com/fepegar/torchio/issues?q=author%3Acepa995" title="Bug reports">🐛</a></td>
      <td align="center" valign="top" width="14.28%"><a href="https://github.com/srg9000"><img src="https://avatars.githubusercontent.com/u/26834833?v=4?s=100" width="100px;" alt="Sajan Gohil"/><br /><sub><b>Sajan Gohil</b></sub></a><br /><a href="https://github.com/fepegar/torchio/issues?q=author%3Asrg9000" title="Bug reports">🐛</a></td>
      <td align="center" valign="top" width="14.28%"><a href="https://bandism.net/"><img src="https://avatars.githubusercontent.com/u/22633385?v=4?s=100" width="100px;" alt="Ikko Ashimine"/><br /><sub><b>Ikko Ashimine</b></sub></a><br /><a href="https://github.com/fepegar/torchio/commits?author=eltociear" title="Documentation">📖</a></td>
      <td align="center" valign="top" width="14.28%"><a href="https://github.com/laynr"><img src="https://avatars.githubusercontent.com/u/775607?v=4?s=100" width="100px;" alt="laynr"/><br /><sub><b>laynr</b></sub></a><br /><a href="https://github.com/fepegar/torchio/commits?author=laynr" title="Documentation">📖</a></td>
    </tr>
    <tr>
      <td align="center" valign="top" width="14.28%"><a href="https://github.com/omarespejel"><img src="https://avatars.githubusercontent.com/u/4755430?v=4?s=100" width="100px;" alt="Omar U. Espejel"/><br /><sub><b>Omar U. Espejel</b></sub></a><br /><a href="#audio-omarespejel" title="Audio">🔊</a></td>
      <td align="center" valign="top" width="14.28%"><a href="https://github.com/jamesobutler"><img src="https://avatars.githubusercontent.com/u/15837524?v=4?s=100" width="100px;" alt="James Butler"/><br /><sub><b>James Butler</b></sub></a><br /><a href="https://github.com/fepegar/torchio/issues?q=author%3Ajamesobutler" title="Bug reports">🐛</a></td>
      <td align="center" valign="top" width="14.28%"><a href="https://github.com/res191"><img src="https://avatars.githubusercontent.com/u/6549034?v=4?s=100" width="100px;" alt="res191"/><br /><sub><b>res191</b></sub></a><br /><a href="#fundingFinding-res191" title="Funding Finding">🔍</a></td>
      <td align="center" valign="top" width="14.28%"><a href="https://github.com/nengwp"><img src="https://avatars.githubusercontent.com/u/44516353?v=4?s=100" width="100px;" alt="nengwp"/><br /><sub><b>nengwp</b></sub></a><br /><a href="https://github.com/fepegar/torchio/issues?q=author%3Anengwp" title="Bug reports">🐛</a> <a href="https://github.com/fepegar/torchio/commits?author=nengwp" title="Documentation">📖</a></td>
      <td align="center" valign="top" width="14.28%"><a href="https://github.com/susanveraclarke"><img src="https://avatars.githubusercontent.com/u/93313094?v=4?s=100" width="100px;" alt="susanveraclarke"/><br /><sub><b>susanveraclarke</b></sub></a><br /><a href="#design-susanveraclarke" title="Design">🎨</a></td>
      <td align="center" valign="top" width="14.28%"><a href="http://nepersica.tistory.com"><img src="https://avatars.githubusercontent.com/u/45097022?v=4?s=100" width="100px;" alt="nepersica"/><br /><sub><b>nepersica</b></sub></a><br /><a href="https://github.com/fepegar/torchio/issues?q=author%3Anepersica" title="Bug reports">🐛</a></td>
      <td align="center" valign="top" width="14.28%"><a href="http://spenhouet.com"><img src="https://avatars.githubusercontent.com/u/7819068?v=4?s=100" width="100px;" alt="Sebastian Penhouet"/><br /><sub><b>Sebastian Penhouet</b></sub></a><br /><a href="#ideas-Spenhouet" title="Ideas, Planning, & Feedback">🤔</a></td>
    </tr>
    <tr>
      <td align="center" valign="top" width="14.28%"><a href="https://github.com/Bigsealion"><img src="https://avatars.githubusercontent.com/u/23148550?v=4?s=100" width="100px;" alt="Bigsealion"/><br /><sub><b>Bigsealion</b></sub></a><br /><a href="https://github.com/fepegar/torchio/issues?q=author%3ABigsealion" title="Bug reports">🐛</a></td>
      <td align="center" valign="top" width="14.28%"><a href="https://www.kitware.com/dzenan-zukic/"><img src="https://avatars.githubusercontent.com/u/1792121?v=4?s=100" width="100px;" alt="Dženan Zukić"/><br /><sub><b>Dženan Zukić</b></sub></a><br /><a href="https://github.com/fepegar/torchio/pulls?q=is%3Apr+reviewed-by%3Adzenanz" title="Reviewed Pull Requests">👀</a></td>
      <td align="center" valign="top" width="14.28%"><a href="https://github.com/vasl12"><img src="https://avatars.githubusercontent.com/u/15161465?v=4?s=100" width="100px;" alt="vasl12"/><br /><sub><b>vasl12</b></sub></a><br /><a href="#tutorial-vasl12" title="Tutorials">✅</a> <a href="https://github.com/fepegar/torchio/issues?q=author%3Avasl12" title="Bug reports">🐛</a></td>
      <td align="center" valign="top" width="14.28%"><a href="http://perso.telecom-bretagne.eu/francoisrousseau"><img src="https://avatars.githubusercontent.com/u/398895?v=4?s=100" width="100px;" alt="François Rousseau"/><br /><sub><b>François Rousseau</b></sub></a><br /><a href="https://github.com/fepegar/torchio/issues?q=author%3Arousseau" title="Bug reports">🐛</a></td>
      <td align="center" valign="top" width="14.28%"><a href="https://github.com/snavalm"><img src="https://avatars.githubusercontent.com/u/35732360?v=4?s=100" width="100px;" alt="snavalm"/><br /><sub><b>snavalm</b></sub></a><br /><a href="https://github.com/fepegar/torchio/commits?author=snavalm" title="Code">💻</a></td>
      <td align="center" valign="top" width="14.28%"><a href="http://jcreinhold.com"><img src="https://avatars.githubusercontent.com/u/5241441?v=4?s=100" width="100px;" alt="Jacob Reinhold"/><br /><sub><b>Jacob Reinhold</b></sub></a><br /><a href="https://github.com/fepegar/torchio/commits?author=jcreinhold" title="Code">💻</a></td>
      <td align="center" valign="top" width="14.28%"><a href="https://github.com/Hsuxu"><img src="https://avatars.githubusercontent.com/u/15630477?v=4?s=100" width="100px;" alt="Hsu"/><br /><sub><b>Hsu</b></sub></a><br /><a href="https://github.com/fepegar/torchio/issues?q=author%3AHsuxu" title="Bug reports">🐛</a></td>
    </tr>
    <tr>
      <td align="center" valign="top" width="14.28%"><a href="https://github.com/snipdome"><img src="https://avatars.githubusercontent.com/u/72035308?v=4?s=100" width="100px;" alt="snipdome"/><br /><sub><b>snipdome</b></sub></a><br /><a href="https://github.com/fepegar/torchio/issues?q=author%3Asnipdome" title="Bug reports">🐛</a></td>
      <td align="center" valign="top" width="14.28%"><a href="https://github.com/iamSmallY"><img src="https://avatars.githubusercontent.com/u/45689960?v=4?s=100" width="100px;" alt="SmallY"/><br /><sub><b>SmallY</b></sub></a><br /><a href="https://github.com/fepegar/torchio/issues?q=author%3AiamSmallY" title="Bug reports">🐛</a></td>
      <td align="center" valign="top" width="14.28%"><a href="https://github.com/guigautier"><img src="https://avatars.githubusercontent.com/u/45590481?v=4?s=100" width="100px;" alt="guigautier"/><br /><sub><b>guigautier</b></sub></a><br /><a href="#ideas-guigautier" title="Ideas, Planning, & Feedback">🤔</a></td>
      <td align="center" valign="top" width="14.28%"><a href="https://github.com/AyedSamy"><img src="https://avatars.githubusercontent.com/u/55320208?v=4?s=100" width="100px;" alt="AyedSamy"/><br /><sub><b>AyedSamy</b></sub></a><br /><a href="https://github.com/fepegar/torchio/issues?q=author%3AAyedSamy" title="Bug reports">🐛</a></td>
      <td align="center" valign="top" width="14.28%"><a href="http://delanover.com"><img src="https://avatars.githubusercontent.com/u/3540650?v=4?s=100" width="100px;" alt="J. Miguel Valverde"/><br /><sub><b>J. Miguel Valverde</b></sub></a><br /><a href="#ideas-jmlipman" title="Ideas, Planning, & Feedback">🤔</a> <a href="https://github.com/fepegar/torchio/commits?author=jmlipman" title="Code">💻</a> <a href="https://github.com/fepegar/torchio/issues?q=author%3Ajmlipman" title="Bug reports">🐛</a></td>
      <td align="center" valign="top" width="14.28%"><a href="http://josegcpa.github.io"><img src="https://avatars.githubusercontent.com/u/40271262?v=4?s=100" width="100px;" alt="José Guilherme Almeida"/><br /><sub><b>José Guilherme Almeida</b></sub></a><br /><a href="#ideas-josegcpa" title="Ideas, Planning, & Feedback">🤔</a></td>
      <td align="center" valign="top" width="14.28%"><a href="https://github.com/saikhu"><img src="https://avatars.githubusercontent.com/u/24922057?v=4?s=100" width="100px;" alt="Asim Usman"/><br /><sub><b>Asim Usman</b></sub></a><br /><a href="https://github.com/fepegar/torchio/issues?q=author%3Asaikhu" title="Bug reports">🐛</a></td>
    </tr>
    <tr>
      <td align="center" valign="top" width="14.28%"><a href="https://github.com/cbri92"><img src="https://avatars.githubusercontent.com/u/70302171?v=4?s=100" width="100px;" alt="cbri92"/><br /><sub><b>cbri92</b></sub></a><br /><a href="https://github.com/fepegar/torchio/issues?q=author%3Acbri92" title="Bug reports">🐛</a></td>
      <td align="center" valign="top" width="14.28%"><a href="https://github.com/iimog"><img src="https://avatars.githubusercontent.com/u/7403236?v=4?s=100" width="100px;" alt="Markus J. Ankenbrand"/><br /><sub><b>Markus J. Ankenbrand</b></sub></a><br /><a href="https://github.com/fepegar/torchio/issues?q=author%3Aiimog" title="Bug reports">🐛</a></td>
      <td align="center" valign="top" width="14.28%"><a href="https://yanivresearch.info/"><img src="https://avatars.githubusercontent.com/u/338645?v=4?s=100" width="100px;" alt="Ziv Yaniv"/><br /><sub><b>Ziv Yaniv</b></sub></a><br /><a href="https://github.com/fepegar/torchio/commits?author=zivy" title="Documentation">📖</a></td>
      <td align="center" valign="top" width="14.28%"><a href="https://github.com/LucaLumetti"><img src="https://avatars.githubusercontent.com/u/7543386?v=4?s=100" width="100px;" alt="Luca Lumetti"/><br /><sub><b>Luca Lumetti</b></sub></a><br /><a href="https://github.com/fepegar/torchio/commits?author=LucaLumetti" title="Code">💻</a> <a href="https://github.com/fepegar/torchio/commits?author=LucaLumetti" title="Documentation">📖</a></td>
      <td align="center" valign="top" width="14.28%"><a href="https://github.com/chagelo"><img src="https://avatars.githubusercontent.com/u/49865033?v=4?s=100" width="100px;" alt="chagelo"/><br /><sub><b>chagelo</b></sub></a><br /><a href="https://github.com/fepegar/torchio/issues?q=author%3Achagelo" title="Bug reports">🐛</a></td>
      <td align="center" valign="top" width="14.28%"><a href="https://github.com/mueller-franzes"><img src="https://avatars.githubusercontent.com/u/56117447?v=4?s=100" width="100px;" alt="mueller-franzes"/><br /><sub><b>mueller-franzes</b></sub></a><br /><a href="https://github.com/fepegar/torchio/commits?author=mueller-franzes" title="Code">💻</a> <a href="https://github.com/fepegar/torchio/issues?q=author%3Amueller-franzes" title="Bug reports">🐛</a></td>
      <td align="center" valign="top" width="14.28%"><a href="https://github.com/wahabk"><img src="https://avatars.githubusercontent.com/u/43846328?v=4?s=100" width="100px;" alt="Abdelwahab Kawafi"/><br /><sub><b>Abdelwahab Kawafi</b></sub></a><br /><a href="https://github.com/fepegar/torchio/issues?q=author%3Awahabk" title="Bug reports">🐛</a></td>
    </tr>
    <tr>
      <td align="center" valign="top" width="14.28%"><a href="http://arthurmasson.xyz"><img src="https://avatars.githubusercontent.com/u/1814799?v=4?s=100" width="100px;" alt="Arthur Masson"/><br /><sub><b>Arthur Masson</b></sub></a><br /><a href="https://github.com/fepegar/torchio/issues?q=author%3Aarthursw" title="Bug reports">🐛</a> <a href="https://github.com/fepegar/torchio/commits?author=arthursw" title="Documentation">📖</a></td>
      <td align="center" valign="top" width="14.28%"><a href="https://github.com/hsyang1222"><img src="https://avatars.githubusercontent.com/u/79962117?v=4?s=100" width="100px;" alt="양현식"/><br /><sub><b>양현식</b></sub></a><br /><a href="https://github.com/fepegar/torchio/commits?author=hsyang1222" title="Code">💻</a></td>
      <td align="center" valign="top" width="14.28%"><a href="https://github.com/nicoloesch"><img src="https://avatars.githubusercontent.com/u/70891565?v=4?s=100" width="100px;" alt="nicoloesch"/><br /><sub><b>nicoloesch</b></sub></a><br /><a href="https://github.com/fepegar/torchio/commits?author=nicoloesch" title="Code">💻</a> <a href="https://github.com/fepegar/torchio/issues?q=author%3Anicoloesch" title="Bug reports">🐛</a></td>
      <td align="center" valign="top" width="14.28%"><a href="https://github.com/vedal"><img src="https://avatars.githubusercontent.com/u/22004000?v=4?s=100" width="100px;" alt="Amund Vedal"/><br /><sub><b>Amund Vedal</b></sub></a><br /><a href="https://github.com/fepegar/torchio/commits?author=vedal" title="Documentation">📖</a></td>
      <td align="center" valign="top" width="14.28%"><a href="https://github.com/alabamagan"><img src="https://avatars.githubusercontent.com/u/11690091?v=4?s=100" width="100px;" alt="Alabamagan"/><br /><sub><b>Alabamagan</b></sub></a><br /><a href="https://github.com/fepegar/torchio/issues?q=author%3Aalabamagan" title="Bug reports">🐛</a></td>
      <td align="center" valign="top" width="14.28%"><a href="https://github.com/sbdoherty"><img src="https://avatars.githubusercontent.com/u/46537211?v=4?s=100" width="100px;" alt="sbdoherty"/><br /><sub><b>sbdoherty</b></sub></a><br /><a href="https://github.com/fepegar/torchio/commits?author=sbdoherty" title="Documentation">📖</a></td>
      <td align="center" valign="top" width="14.28%"><a href="https://github.com/Zhack47"><img src="https://avatars.githubusercontent.com/u/54006084?v=4?s=100" width="100px;" alt="Zhack47"/><br /><sub><b>Zhack47</b></sub></a><br /><a href="https://github.com/fepegar/torchio/issues?q=author%3AZhack47" title="Bug reports">🐛</a></td>
    </tr>
    <tr>
      <td align="center" valign="top" width="14.28%"><a href="https://github.com/blakedewey"><img src="https://avatars.githubusercontent.com/u/4713571?v=4?s=100" width="100px;" alt="Blake Dewey"/><br /><sub><b>Blake Dewey</b></sub></a><br /><a href="https://github.com/fepegar/torchio/commits?author=blakedewey" title="Documentation">📖</a></td>
      <td align="center" valign="top" width="14.28%"><a href="https://github.com/haughty-yeon"><img src="https://avatars.githubusercontent.com/u/84639487?v=4?s=100" width="100px;" alt="Doyeon Kim"/><br /><sub><b>Doyeon Kim</b></sub></a><br /><a href="https://github.com/fepegar/torchio/issues?q=author%3Ahaughty-yeon" title="Bug reports">🐛</a></td>
      <td align="center" valign="top" width="14.28%"><a href="https://github.com/KonoMaxi"><img src="https://avatars.githubusercontent.com/u/13138999?v=4?s=100" width="100px;" alt="KonoMaxi"/><br /><sub><b>KonoMaxi</b></sub></a><br /><a href="https://github.com/fepegar/torchio/issues?q=author%3AKonoMaxi" title="Bug reports">🐛</a></td>
      <td align="center" valign="top" width="14.28%"><a href="http://www.etsmtl.ca"><img src="https://avatars.githubusercontent.com/u/1707237?v=4?s=100" width="100px;" alt="Laurent Chauvin"/><br /><sub><b>Laurent Chauvin</b></sub></a><br /><a href="https://github.com/fepegar/torchio/issues?q=author%3Alchauvin" title="Bug reports">🐛</a></td>
      <td align="center" valign="top" width="14.28%"><a href="http://christianhinge.com"><img src="https://avatars.githubusercontent.com/u/17361630?v=4?s=100" width="100px;" alt="Christian Hinge"/><br /><sub><b>Christian Hinge</b></sub></a><br /><a href="https://github.com/fepegar/torchio/issues?q=author%3AChristianHinge" title="Bug reports">🐛</a></td>
      <td align="center" valign="top" width="14.28%"><a href="https://github.com/zzz123xyz"><img src="https://avatars.githubusercontent.com/u/2671968?v=4?s=100" width="100px;" alt="zzz123xyz"/><br /><sub><b>zzz123xyz</b></sub></a><br /><a href="https://github.com/fepegar/torchio/issues?q=author%3Azzz123xyz" title="Bug reports">🐛</a></td>
    </tr>
  </tbody>
</table>

<!-- markdownlint-restore -->
<!-- prettier-ignore-end -->

<!-- ALL-CONTRIBUTORS-LIST:END -->

This project follows the
[all-contributors](https://github.com/all-contributors/all-contributors)
specification. Contributions of any kind welcome!

Raw data

            {
    "_id": null,
    "home_page": "http://torchio.rtfd.io",
    "name": "torchio",
    "maintainer": "Fernando Perez-Garcia",
    "docs_url": null,
    "requires_python": "<3.13,>=3.8",
    "maintainer_email": "fepegar@gmail.com",
    "keywords": "medical image processing pytorch augmentation mri",
    "author": "TorchIO contributors",
    "author_email": "",
    "download_url": "https://files.pythonhosted.org/packages/30/98/3e26009334e1e90e30b3f4fe99d9d3e081ae69118145e30a7c6fcbf6550f/torchio-0.19.6.tar.gz",
    "platform": "OS Independent",
    "description": "<!-- markdownlint-disable -->\n<p align=\"center\">\n  <a href=\"http://torchio.rtfd.io/\">\n    <img src=\"https://raw.githubusercontent.com/fepegar/torchio/main/docs/source/favicon_io/for_readme_2000x462.png\" alt=\"TorchIO logo\">\n  </a>\n</p>\n<!-- markdownlint-restore -->\n\n> *Tools like TorchIO are a symptom of the maturation of medical AI research using deep learning techniques*.\n\nJack Clark, Policy Director\nat [OpenAI](https://openai.com/) ([link](https://jack-clark.net/2020/03/17/)).\n\n---\n\n<!-- markdownlint-disable -->\n<table align=\"center\">\n    <tr>\n        <td align=\"left\">\n            <b>Package</b>\n        </td>\n        <td align=\"center\">\n            <a href=\"https://pypi.org/project/torchio/\">\n                <img src=\"https://img.shields.io/pypi/dm/torchio.svg?label=PyPI%20downloads&logo=python&logoColor=white\" alt=\"PyPI downloads\">\n            </a>\n            <a href=\"https://pypi.org/project/torchio/\">\n                <img src=\"https://img.shields.io/pypi/v/torchio?label=PyPI%20version&logo=python&logoColor=white\" alt=\"PyPI version\">\n            </a>\n            <a href=\"https://anaconda.org/conda-forge/torchio\">\n                <img src=\"https://img.shields.io/conda/v/conda-forge/torchio.svg?label=conda-forge&logo=conda-forge\" alt=\"Conda version\">\n            </a>\n        </td>\n    </tr>\n    <tr>\n        <td align=\"left\">\n            <b>CI</b>\n        </td>\n        <td align=\"center\">\n            <a href=\"https://github.com/fepegar/torchio/actions/workflows/tests.yml\">\n                <img src=\"https://github.com/fepegar/torchio/actions/workflows/tests.yml/badge.svg\" alt=\"Tests status\">\n            </a>\n            <a href=\"https://torchio.rtfd.io/?badge=latest\">\n                <img src=\"https://img.shields.io/readthedocs/torchio?label=Docs&logo=Read%20the%20Docs\" alt=\"Documentation status\">\n            </a>\n            <a href=\"https://codecov.io/github/fepegar/torchio\">\n                <img src=\"https://codecov.io/gh/fepegar/torchio/branch/main/graphs/badge.svg\" alt=\"Coverage status\">\n            </a>\n        </td>\n    </tr>\n    <tr>\n        <td align=\"left\">\n            <b>Code</b>\n        </td>\n        <td align=\"center\">\n            <a href=\"https://github.com/psf/black\">\n                <img src=\"https://img.shields.io/badge/code%20style-black-000000.svg\" alt=\"Code quality\">\n            </a>\n            <a href=\"https://scrutinizer-ci.com/g/fepegar/torchio/?branch=main\">\n                <img src=\"https://img.shields.io/scrutinizer/g/fepegar/torchio.svg?label=Code%20quality&logo=scrutinizer\" alt=\"Code quality\">\n            </a>\n            <a href=\"https://codeclimate.com/github/fepegar/torchio/maintainability\">\n                <img src=\"https://api.codeclimate.com/v1/badges/518673e49a472dd5714d/maintainability\" alt=\"Code maintainability\">\n            </a>\n            <a href=\"https://github.com/pre-commit/pre-commit\">\n                <img src=\"https://img.shields.io/badge/pre--commit-enabled-brightgreen?logo=pre-commit&logoColor=white\" alt=\"pre-commit\">\n            </a>\n        </td>\n    </tr>\n    <tr>\n        <td align=\"left\">\n            <b>Tutorials</b>\n        </td>\n        <td align=\"center\">\n            <a href=\"https://github.com/fepegar/torchio/blob/main/tutorials/README.md\">\n                <img src=\"https://colab.research.google.com/assets/colab-badge.svg\" alt=\"Google Colab\">\n            </a>\n        </td>\n    </tr>\n    <tr>\n        <td align=\"left\">\n            <b>Community</b>\n        </td>\n        <td align=\"center\">\n            <a href=\"https://join.slack.com/t/torchioworkspace/shared_invite/zt-exgpd5rm-BTpxg2MazwiiMDw7X9xMFg\">\n                <img src=\"https://img.shields.io/badge/TorchIO-Join%20on%20Slack-blueviolet?style=flat&logo=slack\" alt=\"Slack\">\n            </a>\n            <a href=\"https://twitter.com/TorchIOLib\">\n                <img src=\"https://img.shields.io/twitter/url/https/twitter.com/TorchIOLib.svg?style=social&label=Follow%20%40TorchIOLib\" alt=\"Twitter\">\n            </a>\n            <a href=\"https://twitter.com/TorchIO_commits\">\n                <img src=\"https://img.shields.io/twitter/url/https/twitter.com/TorchIO_commits.svg?style=social&label=Follow%20%40TorchIO_commits\" alt=\"Twitter\">\n            </a>\n            <a href=\"https://www.youtube.com/watch?v=UEUVSw5-M9M\">\n                <img src=\"https://img.shields.io/youtube/views/UEUVSw5-M9M?label=watch&style=social\" alt=\"YouTube\">\n            </a>\n        </td>\n    </tr>\n</table>\n\n---\n\n<p align=\"center\">\n  <a href=\"https://torchio.readthedocs.io/transforms/augmentation.html\">\n    <img style=\"width: 600px; overflow: hidden;\" src=\"https://raw.githubusercontent.com/fepegar/torchio/main/docs/images/fpg_progressive.gif\" alt=\"Progressive artifacts\">\n  </a>\n</p>\n\n<p align=\"center\">\n  <a href=\"https://torchio.readthedocs.io/transforms/augmentation.html\">\n    <img style=\"width: 360px; height: 360px; overflow: hidden;\" src=\"https://raw.githubusercontent.com/fepegar/torchio/main/docs/images/augmentation.gif\" alt=\"Augmentation\">\n  </a>\n</p>\n\n---\n\n<table align=\"center\">\n    <tr>\n        <td align=\"center\">Original</td>\n        <td align=\"center\">\n            <a href=\"http://torchio.rtfd.io/transforms/augmentation.html#randomblur\">Random blur</a>\n        </td>\n    </tr>\n    <tr>\n        <td align=\"center\"><img src=\"https://raw.githubusercontent.com/fepegar/torchio/main/docs/images/gifs_readme/1_Lambda_mri.png\" alt=\"Original\"></td>\n        <td align=\"center\">\n            <a href=\"http://torchio.rtfd.io/transforms/augmentation.html#randomblur\">\n                <img src=\"https://raw.githubusercontent.com/fepegar/torchio/main/docs/images/gifs_readme/2_RandomBlur_mri.gif\" alt=\"Random blur\">\n            </a>\n        </td>\n    </tr>\n    <tr>\n        <td align=\"center\">\n            <a href=\"http://torchio.rtfd.io/transforms/augmentation.html#randomflip\">Random flip</a>\n        </td>\n        <td align=\"center\">\n            <a href=\"http://torchio.rtfd.io/transforms/augmentation.html#randomnoise\">Random noise</a>\n        </td>\n    </tr>\n    <tr>\n        <td align=\"center\">\n            <a href=\"http://torchio.rtfd.io/transforms/augmentation.html#randomflip\">\n                <img src=\"https://raw.githubusercontent.com/fepegar/torchio/main/docs/images/gifs_readme/3_RandomFlip_mri.gif\" alt=\"Random flip\">\n            </a>\n        </td>\n        <td align=\"center\">\n            <a href=\"http://torchio.rtfd.io/transforms/augmentation.html#randomnoise\">\n                <img src=\"https://raw.githubusercontent.com/fepegar/torchio/main/docs/images/gifs_readme/4_Compose_mri.gif\" alt=\"Random noise\">\n            </a>\n        </td>\n    </tr>\n    <tr>\n        <td align=\"center\">\n            <a href=\"http://torchio.rtfd.io/transforms/augmentation.html#randomaffine\">Random affine transformation</a>\n        </td>\n        <td align=\"center\">\n            <a href=\"http://torchio.rtfd.io/transforms/augmentation.html#randomelasticdeformation\">Random elastic transformation</a>\n        </td>\n    </tr>\n    <tr>\n        <td align=\"center\">\n            <a href=\"http://torchio.rtfd.io/transforms/augmentation.html#randomaffine\">\n                <img src=\"https://raw.githubusercontent.com/fepegar/torchio/main/docs/images/gifs_readme/5_RandomAffine_mri.gif\" alt=\"Random affine transformation\">\n            </a>\n        </td>\n        <td align=\"center\">\n            <a href=\"http://torchio.rtfd.io/transforms/augmentation.html#randomelasticdeformation\">\n                <img src=\"https://raw.githubusercontent.com/fepegar/torchio/main/docs/images/gifs_readme/6_RandomElasticDeformation_mri.gif\" alt=\"Random elastic transformation\">\n            </a>\n        </td>\n    </tr>\n    <tr>\n        <td align=\"center\">\n            <a href=\"http://torchio.rtfd.io/transforms/augmentation.html#randombiasfield\">Random bias field artifact</a>\n        </td>\n        <td align=\"center\">\n            <a href=\"http://torchio.rtfd.io/transforms/augmentation.html#randommotion\">Random motion artifact</a>\n        </td>\n    </tr>\n    <tr>\n        <td align=\"center\">\n            <a href=\"http://torchio.rtfd.io/transforms/augmentation.html#randombiasfield\">\n                <img src=\"https://raw.githubusercontent.com/fepegar/torchio/main/docs/images/gifs_readme/7_RandomBiasField_mri.gif\" alt=\"Random bias field artifact\">\n            </a>\n        </td>\n        <td align=\"center\">\n            <a href=\"http://torchio.rtfd.io/transforms/augmentation.html#randommotion\">\n                <img src=\"https://raw.githubusercontent.com/fepegar/torchio/main/docs/images/gifs_readme/8_RandomMotion_mri.gif\" alt=\"Random motion artifact\">\n            </a>\n        </td>\n    </tr>\n    <tr>\n        <td align=\"center\">\n            <a href=\"http://torchio.rtfd.io/transforms/augmentation.html#randomspike\">Random spike artifact</a>\n        </td>\n        <td align=\"center\">\n            <a href=\"http://torchio.rtfd.io/transforms/augmentation.html#randomghosting\">Random ghosting artifact</a>\n        </td>\n    </tr>\n    <tr>\n        <td align=\"center\">\n            <a href=\"http://torchio.rtfd.io/transforms/augmentation.html#randomspike\">\n                <img src=\"https://raw.githubusercontent.com/fepegar/torchio/main/docs/images/gifs_readme/9_RandomSpike_mri.gif\" alt=\"Random spike artifact\">\n            </a>\n        </td>\n        <td align=\"center\">\n            <a href=\"http://torchio.rtfd.io/transforms/augmentation.html#randomghosting\">\n                <img src=\"https://raw.githubusercontent.com/fepegar/torchio/main/docs/images/gifs_readme/10_RandomGhosting_mri.gif\" alt=\"Random ghosting artifact\">\n            </a>\n        </td>\n    </tr>\n</table>\n\n---\n\n<p align=\"center\">\n  <a href=\"https://torchio.readthedocs.io/patches/patch_training.html#queue\">\n    <img style=\"width: 640px; height: 360px; overflow: hidden;\" src=\"https://raw.githubusercontent.com/fepegar/torchio/main/docs/images/queue.gif\" alt=\"Queue\">\n  </a>\n</p>\n\n([Queue](https://torchio.readthedocs.io/patches/patch_training.html#queue)\nfor [patch-based training](https://torchio.readthedocs.io/patches/index.html))\n\n<!-- markdownlint-restore -->\n\n---\n\nTorchIO is a Python package containing a set of tools to efficiently\nread, preprocess, sample, augment, and write 3D medical images in deep learning applications\nwritten in [PyTorch](https://pytorch.org/),\nincluding intensity and spatial transforms\nfor data augmentation and preprocessing.\nTransforms include typical computer vision operations\nsuch as random affine transformations and also domain-specific ones such as\nsimulation of intensity artifacts due to\n[MRI magnetic field inhomogeneity](https://mriquestions.com/why-homogeneity.html)\nor [k-space motion artifacts](http://proceedings.mlr.press/v102/shaw19a.html).\n\nThis package has been greatly inspired by NiftyNet,\n[which is not actively maintained anymore](https://github.com/NifTK/NiftyNet/commit/935bf4334cd00fa9f9d50f6a95ddcbfdde4031e0).\n\n## Credits\n\nIf you like this repository, please click on Star!\n\nIf you use this package for your research, please cite our paper:\n\n[F. P\u00e9rez-Garc\u00eda, R. Sparks, and S. Ourselin. *TorchIO: a Python library for efficient loading, preprocessing, augmentation and patch-based sampling of medical images in deep learning*. Computer Methods and Programs in Biomedicine (June 2021), p. 106236. ISSN: 0169-2607.doi:10.1016/j.cmpb.2021.106236.](https://doi.org/10.1016/j.cmpb.2021.106236)\n\nBibTeX entry:\n\n```bibtex\n@article{perez-garcia_torchio_2021,\n    title = {TorchIO: a Python library for efficient loading, preprocessing, augmentation and patch-based sampling of medical images in deep learning},\n    journal = {Computer Methods and Programs in Biomedicine},\n    pages = {106236},\n    year = {2021},\n    issn = {0169-2607},\n    doi = {https://doi.org/10.1016/j.cmpb.2021.106236},\n    url = {https://www.sciencedirect.com/science/article/pii/S0169260721003102},\n    author = {P{\\'e}rez-Garc{\\'i}a, Fernando and Sparks, Rachel and Ourselin, S{\\'e}bastien},\n}\n```\n\nThis project is supported by the following institutions:\n\n- [Engineering and Physical Sciences Research Council (EPSRC) & UK Research and Innovation (UKRI)](https://epsrc.ukri.org/)\n- [EPSRC Centre for Doctoral Training in Intelligent, Integrated Imaging In Healthcare (i4health)](https://www.ucl.ac.uk/intelligent-imaging-healthcare/) (University College London)\n- [Wellcome / EPSRC Centre for Interventional and Surgical Sciences (WEISS)](https://www.ucl.ac.uk/interventional-surgical-sciences/) (University College London)\n- [School of Biomedical Engineering & Imaging Sciences (BMEIS)](https://www.kcl.ac.uk/bmeis) (King's College London)\n\n## Getting started\n\nSee [Getting started](https://torchio.readthedocs.io/quickstart.html) for\n[installation](https://torchio.readthedocs.io/quickstart.html#installation)\ninstructions\nand a [Hello, World!](https://torchio.readthedocs.io/quickstart.html#hello-world)\nexample.\n\nLonger usage examples can be found in the\n[tutorials](https://github.com/fepegar/torchio/blob/main/tutorials/README.md).\n\nAll the documentation is hosted on\n[Read the Docs](http://torchio.rtfd.io/).\n\nPlease\n[open a new issue](https://github.com/fepegar/torchio/issues/new/choose)\nif you think something is missing.\n\n## Contributors\n\nThanks goes to all these people ([emoji key](https://allcontributors.org/docs/en/emoji-key)):\n\n<!-- ALL-CONTRIBUTORS-LIST:START - Do not remove or modify this section -->\n<!-- prettier-ignore-start -->\n<!-- markdownlint-disable -->\n<table>\n  <tbody>\n    <tr>\n      <td align=\"center\" valign=\"top\" width=\"14.28%\"><a href=\"https://github.com/fepegar\"><img src=\"https://avatars1.githubusercontent.com/u/12688084?v=4?s=100\" width=\"100px;\" alt=\"Fernando P\u00e9rez-Garc\u00eda\"/><br /><sub><b>Fernando P\u00e9rez-Garc\u00eda</b></sub></a><br /><a href=\"https://github.com/fepegar/torchio/commits?author=fepegar\" title=\"Code\">\ud83d\udcbb</a> <a href=\"https://github.com/fepegar/torchio/commits?author=fepegar\" title=\"Documentation\">\ud83d\udcd6</a></td>\n      <td align=\"center\" valign=\"top\" width=\"14.28%\"><a href=\"https://github.com/romainVala\"><img src=\"https://avatars1.githubusercontent.com/u/5611962?v=4?s=100\" width=\"100px;\" alt=\"valabregue\"/><br /><sub><b>valabregue</b></sub></a><br /><a href=\"#ideas-romainVala\" title=\"Ideas, Planning, & Feedback\">\ud83e\udd14</a> <a href=\"https://github.com/fepegar/torchio/pulls?q=is%3Apr+reviewed-by%3AromainVala\" title=\"Reviewed Pull Requests\">\ud83d\udc40</a> <a href=\"https://github.com/fepegar/torchio/commits?author=romainVala\" title=\"Code\">\ud83d\udcbb</a> <a href=\"#question-romainVala\" title=\"Answering Questions\">\ud83d\udcac</a> <a href=\"https://github.com/fepegar/torchio/issues?q=author%3AromainVala\" title=\"Bug reports\">\ud83d\udc1b</a></td>\n      <td align=\"center\" valign=\"top\" width=\"14.28%\"><a href=\"https://github.com/GFabien\"><img src=\"https://avatars1.githubusercontent.com/u/39873986?v=4?s=100\" width=\"100px;\" alt=\"GFabien\"/><br /><sub><b>GFabien</b></sub></a><br /><a href=\"https://github.com/fepegar/torchio/commits?author=GFabien\" title=\"Code\">\ud83d\udcbb</a> <a href=\"https://github.com/fepegar/torchio/pulls?q=is%3Apr+reviewed-by%3AGFabien\" title=\"Reviewed Pull Requests\">\ud83d\udc40</a> <a href=\"#ideas-GFabien\" title=\"Ideas, Planning, & Feedback\">\ud83e\udd14</a></td>\n      <td align=\"center\" valign=\"top\" width=\"14.28%\"><a href=\"https://github.com/GReguig\"><img src=\"https://avatars1.githubusercontent.com/u/11228281?v=4?s=100\" width=\"100px;\" alt=\"G.Reguig\"/><br /><sub><b>G.Reguig</b></sub></a><br /><a href=\"https://github.com/fepegar/torchio/commits?author=GReguig\" title=\"Code\">\ud83d\udcbb</a></td>\n      <td align=\"center\" valign=\"top\" width=\"14.28%\"><a href=\"https://github.com/nwschurink\"><img src=\"https://avatars3.githubusercontent.com/u/12720130?v=4?s=100\" width=\"100px;\" alt=\"Niels Schurink\"/><br /><sub><b>Niels Schurink</b></sub></a><br /><a href=\"https://github.com/fepegar/torchio/commits?author=nwschurink\" title=\"Code\">\ud83d\udcbb</a></td>\n      <td align=\"center\" valign=\"top\" width=\"14.28%\"><a href=\"https://www.linkedin.com/in/ibrhad/ \"><img src=\"https://avatars3.githubusercontent.com/u/18015788?v=4?s=100\" width=\"100px;\" alt=\"Ibrahim Hadzic\"/><br /><sub><b>Ibrahim Hadzic</b></sub></a><br /><a href=\"https://github.com/fepegar/torchio/issues?q=author%3Aibro45\" title=\"Bug reports\">\ud83d\udc1b</a></td>\n      <td align=\"center\" valign=\"top\" width=\"14.28%\"><a href=\"https://github.com/ReubenDo\"><img src=\"https://avatars1.githubusercontent.com/u/17268715?v=4?s=100\" width=\"100px;\" alt=\"ReubenDo\"/><br /><sub><b>ReubenDo</b></sub></a><br /><a href=\"#ideas-ReubenDo\" title=\"Ideas, Planning, & Feedback\">\ud83e\udd14</a></td>\n    </tr>\n    <tr>\n      <td align=\"center\" valign=\"top\" width=\"14.28%\"><a href=\"http://julianklug.com\"><img src=\"https://avatars0.githubusercontent.com/u/8020367?v=4?s=100\" width=\"100px;\" alt=\"Julian Klug\"/><br /><sub><b>Julian Klug</b></sub></a><br /><a href=\"#ideas-MonsieurWave\" title=\"Ideas, Planning, & Feedback\">\ud83e\udd14</a></td>\n      <td align=\"center\" valign=\"top\" width=\"14.28%\"><a href=\"https://github.com/dvolgyes\"><img src=\"https://avatars1.githubusercontent.com/u/425560?v=4?s=100\" width=\"100px;\" alt=\"David V\u00f6lgyes\"/><br /><sub><b>David V\u00f6lgyes</b></sub></a><br /><a href=\"#ideas-dvolgyes\" title=\"Ideas, Planning, & Feedback\">\ud83e\udd14</a> <a href=\"https://github.com/fepegar/torchio/commits?author=dvolgyes\" title=\"Code\">\ud83d\udcbb</a></td>\n      <td align=\"center\" valign=\"top\" width=\"14.28%\"><a href=\"https://www.linkedin.com/in/jfillionr/\"><img src=\"https://avatars0.githubusercontent.com/u/219043?v=4?s=100\" width=\"100px;\" alt=\"Jean-Christophe Fillion-Robin\"/><br /><sub><b>Jean-Christophe Fillion-Robin</b></sub></a><br /><a href=\"https://github.com/fepegar/torchio/commits?author=jcfr\" title=\"Documentation\">\ud83d\udcd6</a></td>\n      <td align=\"center\" valign=\"top\" width=\"14.28%\"><a href=\"http://surajpai.tech\"><img src=\"https://avatars1.githubusercontent.com/u/10467804?v=4?s=100\" width=\"100px;\" alt=\"Suraj Pai\"/><br /><sub><b>Suraj Pai</b></sub></a><br /><a href=\"#ideas-surajpaib\" title=\"Ideas, Planning, & Feedback\">\ud83e\udd14</a></td>\n      <td align=\"center\" valign=\"top\" width=\"14.28%\"><a href=\"https://github.com/bcdarwin\"><img src=\"https://avatars2.githubusercontent.com/u/164148?v=4?s=100\" width=\"100px;\" alt=\"Ben Darwin\"/><br /><sub><b>Ben Darwin</b></sub></a><br /><a href=\"#ideas-bcdarwin\" title=\"Ideas, Planning, & Feedback\">\ud83e\udd14</a></td>\n      <td align=\"center\" valign=\"top\" width=\"14.28%\"><a href=\"https://github.com/OeslleLucena\"><img src=\"https://avatars0.githubusercontent.com/u/19919194?v=4?s=100\" width=\"100px;\" alt=\"Oeslle Lucena\"/><br /><sub><b>Oeslle Lucena</b></sub></a><br /><a href=\"https://github.com/fepegar/torchio/issues?q=author%3AOeslleLucena\" title=\"Bug reports\">\ud83d\udc1b</a></td>\n      <td align=\"center\" valign=\"top\" width=\"14.28%\"><a href=\"http://www.soumick.com\"><img src=\"https://avatars0.githubusercontent.com/u/20525305?v=4?s=100\" width=\"100px;\" alt=\"Soumick Chatterjee\"/><br /><sub><b>Soumick Chatterjee</b></sub></a><br /><a href=\"https://github.com/fepegar/torchio/commits?author=soumickmj\" title=\"Code\">\ud83d\udcbb</a></td>\n    </tr>\n    <tr>\n      <td align=\"center\" valign=\"top\" width=\"14.28%\"><a href=\"https://github.com/neuronflow\"><img src=\"https://avatars1.githubusercontent.com/u/7048826?v=4?s=100\" width=\"100px;\" alt=\"neuronflow\"/><br /><sub><b>neuronflow</b></sub></a><br /><a href=\"https://github.com/fepegar/torchio/commits?author=neuronflow\" title=\"Documentation\">\ud83d\udcd6</a></td>\n      <td align=\"center\" valign=\"top\" width=\"14.28%\"><a href=\"https://github.com/jwitos\"><img src=\"https://avatars2.githubusercontent.com/u/948674?v=4?s=100\" width=\"100px;\" alt=\"Jan Witowski\"/><br /><sub><b>Jan Witowski</b></sub></a><br /><a href=\"https://github.com/fepegar/torchio/commits?author=jwitos\" title=\"Documentation\">\ud83d\udcd6</a></td>\n      <td align=\"center\" valign=\"top\" width=\"14.28%\"><a href=\"https://github.com/dmus\"><img src=\"https://avatars1.githubusercontent.com/u/464378?v=4?s=100\" width=\"100px;\" alt=\"Derk Mus\"/><br /><sub><b>Derk Mus</b></sub></a><br /><a href=\"https://github.com/fepegar/torchio/commits?author=dmus\" title=\"Documentation\">\ud83d\udcd6</a> <a href=\"https://github.com/fepegar/torchio/commits?author=dmus\" title=\"Code\">\ud83d\udcbb</a> <a href=\"https://github.com/fepegar/torchio/issues?q=author%3Admus\" title=\"Bug reports\">\ud83d\udc1b</a></td>\n      <td align=\"center\" valign=\"top\" width=\"14.28%\"><a href=\"http://www.linkedin.com/in/che85\"><img src=\"https://avatars2.githubusercontent.com/u/10195822?v=4?s=100\" width=\"100px;\" alt=\"Christian Herz\"/><br /><sub><b>Christian Herz</b></sub></a><br /><a href=\"https://github.com/fepegar/torchio/issues?q=author%3Ache85\" title=\"Bug reports\">\ud83d\udc1b</a></td>\n      <td align=\"center\" valign=\"top\" width=\"14.28%\"><a href=\"https://github.com/efirdc\"><img src=\"https://avatars3.githubusercontent.com/u/5416313?v=4?s=100\" width=\"100px;\" alt=\"Cory Efird\"/><br /><sub><b>Cory Efird</b></sub></a><br /><a href=\"https://github.com/fepegar/torchio/commits?author=efirdc\" title=\"Code\">\ud83d\udcbb</a> <a href=\"https://github.com/fepegar/torchio/issues?q=author%3Aefirdc\" title=\"Bug reports\">\ud83d\udc1b</a></td>\n      <td align=\"center\" valign=\"top\" width=\"14.28%\"><a href=\"https://github.com/estebvac\"><img src=\"https://avatars.githubusercontent.com/u/21016728?v=4?s=100\" width=\"100px;\" alt=\"Esteban Vaca C.\"/><br /><sub><b>Esteban Vaca C.</b></sub></a><br /><a href=\"https://github.com/fepegar/torchio/issues?q=author%3Aestebvac\" title=\"Bug reports\">\ud83d\udc1b</a></td>\n      <td align=\"center\" valign=\"top\" width=\"14.28%\"><a href=\"https://stackoverflow.com/users/3250829/rayryeng?tab=profile\"><img src=\"https://avatars.githubusercontent.com/u/765375?v=4?s=100\" width=\"100px;\" alt=\"Ray Phan\"/><br /><sub><b>Ray Phan</b></sub></a><br /><a href=\"https://github.com/fepegar/torchio/issues?q=author%3Arayryeng\" title=\"Bug reports\">\ud83d\udc1b</a></td>\n    </tr>\n    <tr>\n      <td align=\"center\" valign=\"top\" width=\"14.28%\"><a href=\"https://github.com/Linardos\"><img src=\"https://avatars.githubusercontent.com/u/26694607?v=4?s=100\" width=\"100px;\" alt=\"Akis Linardos\"/><br /><sub><b>Akis Linardos</b></sub></a><br /><a href=\"https://github.com/fepegar/torchio/issues?q=author%3ALinardos\" title=\"Bug reports\">\ud83d\udc1b</a> <a href=\"https://github.com/fepegar/torchio/commits?author=Linardos\" title=\"Code\">\ud83d\udcbb</a></td>\n      <td align=\"center\" valign=\"top\" width=\"14.28%\"><a href=\"http://nina.brown.15@ucl.ac.uk\"><img src=\"https://avatars.githubusercontent.com/u/56116848?v=4?s=100\" width=\"100px;\" alt=\"Nina Montana-Brown\"/><br /><sub><b>Nina Montana-Brown</b></sub></a><br /><a href=\"https://github.com/fepegar/torchio/commits?author=NMontanaBrown\" title=\"Documentation\">\ud83d\udcd6</a> <a href=\"#infra-NMontanaBrown\" title=\"Infrastructure (Hosting, Build-Tools, etc)\">\ud83d\ude87</a></td>\n      <td align=\"center\" valign=\"top\" width=\"14.28%\"><a href=\"https://github.com/fabien-brulport\"><img src=\"https://avatars.githubusercontent.com/u/32873392?v=4?s=100\" width=\"100px;\" alt=\"fabien-brulport\"/><br /><sub><b>fabien-brulport</b></sub></a><br /><a href=\"https://github.com/fepegar/torchio/issues?q=author%3Afabien-brulport\" title=\"Bug reports\">\ud83d\udc1b</a></td>\n      <td align=\"center\" valign=\"top\" width=\"14.28%\"><a href=\"https://github.com/malteekj\"><img src=\"https://avatars.githubusercontent.com/u/44469884?v=4?s=100\" width=\"100px;\" alt=\"malteekj\"/><br /><sub><b>malteekj</b></sub></a><br /><a href=\"https://github.com/fepegar/torchio/issues?q=author%3Amalteekj\" title=\"Bug reports\">\ud83d\udc1b</a></td>\n      <td align=\"center\" valign=\"top\" width=\"14.28%\"><a href=\"https://github.com/diazandr3s\"><img src=\"https://avatars.githubusercontent.com/u/11991079?v=4?s=100\" width=\"100px;\" alt=\"Andres Diaz-Pinto\"/><br /><sub><b>Andres Diaz-Pinto</b></sub></a><br /><a href=\"https://github.com/fepegar/torchio/issues?q=author%3Adiazandr3s\" title=\"Bug reports\">\ud83d\udc1b</a></td>\n      <td align=\"center\" valign=\"top\" width=\"14.28%\"><a href=\"http://www.cbica.upenn.edu/spati\"><img src=\"https://avatars.githubusercontent.com/u/11719673?v=4?s=100\" width=\"100px;\" alt=\"Sarthak Pati\"/><br /><sub><b>Sarthak Pati</b></sub></a><br /><a href=\"#platform-sarthakpati\" title=\"Packaging/porting to new platform\">\ud83d\udce6</a> <a href=\"https://github.com/fepegar/torchio/commits?author=sarthakpati\" title=\"Documentation\">\ud83d\udcd6</a></td>\n      <td align=\"center\" valign=\"top\" width=\"14.28%\"><a href=\"https://github.com/GabriellaKamlish\"><img src=\"https://avatars.githubusercontent.com/u/26881445?v=4?s=100\" width=\"100px;\" alt=\"GabriellaKamlish\"/><br /><sub><b>GabriellaKamlish</b></sub></a><br /><a href=\"https://github.com/fepegar/torchio/issues?q=author%3AGabriellaKamlish\" title=\"Bug reports\">\ud83d\udc1b</a></td>\n    </tr>\n    <tr>\n      <td align=\"center\" valign=\"top\" width=\"14.28%\"><a href=\"https://github.com/TylerSpears\"><img src=\"https://avatars.githubusercontent.com/u/7096950?v=4?s=100\" width=\"100px;\" alt=\"Tyler Spears\"/><br /><sub><b>Tyler Spears</b></sub></a><br /><a href=\"https://github.com/fepegar/torchio/issues?q=author%3ATylerSpears\" title=\"Bug reports\">\ud83d\udc1b</a></td>\n      <td align=\"center\" valign=\"top\" width=\"14.28%\"><a href=\"http://dagut.ru\"><img src=\"https://avatars.githubusercontent.com/u/7759336?v=4?s=100\" width=\"100px;\" alt=\"DaGuT\"/><br /><sub><b>DaGuT</b></sub></a><br /><a href=\"https://github.com/fepegar/torchio/commits?author=DaGuT\" title=\"Documentation\">\ud83d\udcd6</a></td>\n      <td align=\"center\" valign=\"top\" width=\"14.28%\"><a href=\"https://github.com/hsiangyuzhao\"><img src=\"https://avatars.githubusercontent.com/u/53631393?v=4?s=100\" width=\"100px;\" alt=\"Xiangyu Zhao\"/><br /><sub><b>Xiangyu Zhao</b></sub></a><br /><a href=\"https://github.com/fepegar/torchio/issues?q=author%3Ahsiangyuzhao\" title=\"Bug reports\">\ud83d\udc1b</a></td>\n      <td align=\"center\" valign=\"top\" width=\"14.28%\"><a href=\"https://siahuat0727.github.io\"><img src=\"https://avatars.githubusercontent.com/u/17688111?v=4?s=100\" width=\"100px;\" alt=\"siahuat0727\"/><br /><sub><b>siahuat0727</b></sub></a><br /><a href=\"https://github.com/fepegar/torchio/commits?author=siahuat0727\" title=\"Documentation\">\ud83d\udcd6</a> <a href=\"https://github.com/fepegar/torchio/issues?q=author%3Asiahuat0727\" title=\"Bug reports\">\ud83d\udc1b</a></td>\n      <td align=\"center\" valign=\"top\" width=\"14.28%\"><a href=\"https://github.com/Svdvoort\"><img src=\"https://avatars.githubusercontent.com/u/23049683?v=4?s=100\" width=\"100px;\" alt=\"Svdvoort\"/><br /><sub><b>Svdvoort</b></sub></a><br /><a href=\"https://github.com/fepegar/torchio/commits?author=Svdvoort\" title=\"Code\">\ud83d\udcbb</a></td>\n      <td align=\"center\" valign=\"top\" width=\"14.28%\"><a href=\"https://www.linkedin.com/in/alban-steff-260ab715b/\"><img src=\"https://avatars.githubusercontent.com/u/59876036?v=4?s=100\" width=\"100px;\" alt=\"Albans98\"/><br /><sub><b>Albans98</b></sub></a><br /><a href=\"https://github.com/fepegar/torchio/commits?author=Albans98\" title=\"Code\">\ud83d\udcbb</a></td>\n      <td align=\"center\" valign=\"top\" width=\"14.28%\"><a href=\"https://mattwarkentin.github.io/\"><img src=\"https://avatars.githubusercontent.com/u/27825069?v=4?s=100\" width=\"100px;\" alt=\"Matthew T. Warkentin\"/><br /><sub><b>Matthew T. Warkentin</b></sub></a><br /><a href=\"https://github.com/fepegar/torchio/commits?author=mattwarkentin\" title=\"Code\">\ud83d\udcbb</a></td>\n    </tr>\n    <tr>\n      <td align=\"center\" valign=\"top\" width=\"14.28%\"><a href=\"https://github.com/glupol\"><img src=\"https://avatars.githubusercontent.com/u/57905234?v=4?s=100\" width=\"100px;\" alt=\"glupol\"/><br /><sub><b>glupol</b></sub></a><br /><a href=\"https://github.com/fepegar/torchio/issues?q=author%3Aglupol\" title=\"Bug reports\">\ud83d\udc1b</a></td>\n      <td align=\"center\" valign=\"top\" width=\"14.28%\"><a href=\"https://github.com/ramonemiliani93\"><img src=\"https://avatars.githubusercontent.com/u/14314888?v=4?s=100\" width=\"100px;\" alt=\"ramonemiliani93\"/><br /><sub><b>ramonemiliani93</b></sub></a><br /><a href=\"https://github.com/fepegar/torchio/commits?author=ramonemiliani93\" title=\"Documentation\">\ud83d\udcd6</a> <a href=\"https://github.com/fepegar/torchio/issues?q=author%3Aramonemiliani93\" title=\"Bug reports\">\ud83d\udc1b</a> <a href=\"https://github.com/fepegar/torchio/commits?author=ramonemiliani93\" title=\"Code\">\ud83d\udcbb</a></td>\n      <td align=\"center\" valign=\"top\" width=\"14.28%\"><a href=\"https://github.com/justusschock\"><img src=\"https://avatars.githubusercontent.com/u/12886177?v=4?s=100\" width=\"100px;\" alt=\"Justus Schock\"/><br /><sub><b>Justus Schock</b></sub></a><br /><a href=\"https://github.com/fepegar/torchio/commits?author=justusschock\" title=\"Code\">\ud83d\udcbb</a> <a href=\"https://github.com/fepegar/torchio/issues?q=author%3Ajustusschock\" title=\"Bug reports\">\ud83d\udc1b</a> <a href=\"#ideas-justusschock\" title=\"Ideas, Planning, & Feedback\">\ud83e\udd14</a> <a href=\"https://github.com/fepegar/torchio/pulls?q=is%3Apr+reviewed-by%3Ajustusschock\" title=\"Reviewed Pull Requests\">\ud83d\udc40</a></td>\n      <td align=\"center\" valign=\"top\" width=\"14.28%\"><a href=\"https://github.com/cepa995\"><img src=\"https://avatars.githubusercontent.com/u/67524891?v=4?s=100\" width=\"100px;\" alt=\"Stefan Milorad Radonji\u0107\"/><br /><sub><b>Stefan Milorad Radonji\u0107</b></sub></a><br /><a href=\"https://github.com/fepegar/torchio/issues?q=author%3Acepa995\" title=\"Bug reports\">\ud83d\udc1b</a></td>\n      <td align=\"center\" valign=\"top\" width=\"14.28%\"><a href=\"https://github.com/srg9000\"><img src=\"https://avatars.githubusercontent.com/u/26834833?v=4?s=100\" width=\"100px;\" alt=\"Sajan Gohil\"/><br /><sub><b>Sajan Gohil</b></sub></a><br /><a href=\"https://github.com/fepegar/torchio/issues?q=author%3Asrg9000\" title=\"Bug reports\">\ud83d\udc1b</a></td>\n      <td align=\"center\" valign=\"top\" width=\"14.28%\"><a href=\"https://bandism.net/\"><img src=\"https://avatars.githubusercontent.com/u/22633385?v=4?s=100\" width=\"100px;\" alt=\"Ikko Ashimine\"/><br /><sub><b>Ikko Ashimine</b></sub></a><br /><a href=\"https://github.com/fepegar/torchio/commits?author=eltociear\" title=\"Documentation\">\ud83d\udcd6</a></td>\n      <td align=\"center\" valign=\"top\" width=\"14.28%\"><a href=\"https://github.com/laynr\"><img src=\"https://avatars.githubusercontent.com/u/775607?v=4?s=100\" width=\"100px;\" alt=\"laynr\"/><br /><sub><b>laynr</b></sub></a><br /><a href=\"https://github.com/fepegar/torchio/commits?author=laynr\" title=\"Documentation\">\ud83d\udcd6</a></td>\n    </tr>\n    <tr>\n      <td align=\"center\" valign=\"top\" width=\"14.28%\"><a href=\"https://github.com/omarespejel\"><img src=\"https://avatars.githubusercontent.com/u/4755430?v=4?s=100\" width=\"100px;\" alt=\"Omar U. Espejel\"/><br /><sub><b>Omar U. Espejel</b></sub></a><br /><a href=\"#audio-omarespejel\" title=\"Audio\">\ud83d\udd0a</a></td>\n      <td align=\"center\" valign=\"top\" width=\"14.28%\"><a href=\"https://github.com/jamesobutler\"><img src=\"https://avatars.githubusercontent.com/u/15837524?v=4?s=100\" width=\"100px;\" alt=\"James Butler\"/><br /><sub><b>James Butler</b></sub></a><br /><a href=\"https://github.com/fepegar/torchio/issues?q=author%3Ajamesobutler\" title=\"Bug reports\">\ud83d\udc1b</a></td>\n      <td align=\"center\" valign=\"top\" width=\"14.28%\"><a href=\"https://github.com/res191\"><img src=\"https://avatars.githubusercontent.com/u/6549034?v=4?s=100\" width=\"100px;\" alt=\"res191\"/><br /><sub><b>res191</b></sub></a><br /><a href=\"#fundingFinding-res191\" title=\"Funding Finding\">\ud83d\udd0d</a></td>\n      <td align=\"center\" valign=\"top\" width=\"14.28%\"><a href=\"https://github.com/nengwp\"><img src=\"https://avatars.githubusercontent.com/u/44516353?v=4?s=100\" width=\"100px;\" alt=\"nengwp\"/><br /><sub><b>nengwp</b></sub></a><br /><a href=\"https://github.com/fepegar/torchio/issues?q=author%3Anengwp\" title=\"Bug reports\">\ud83d\udc1b</a> <a href=\"https://github.com/fepegar/torchio/commits?author=nengwp\" title=\"Documentation\">\ud83d\udcd6</a></td>\n      <td align=\"center\" valign=\"top\" width=\"14.28%\"><a href=\"https://github.com/susanveraclarke\"><img src=\"https://avatars.githubusercontent.com/u/93313094?v=4?s=100\" width=\"100px;\" alt=\"susanveraclarke\"/><br /><sub><b>susanveraclarke</b></sub></a><br /><a href=\"#design-susanveraclarke\" title=\"Design\">\ud83c\udfa8</a></td>\n      <td align=\"center\" valign=\"top\" width=\"14.28%\"><a href=\"http://nepersica.tistory.com\"><img src=\"https://avatars.githubusercontent.com/u/45097022?v=4?s=100\" width=\"100px;\" alt=\"nepersica\"/><br /><sub><b>nepersica</b></sub></a><br /><a href=\"https://github.com/fepegar/torchio/issues?q=author%3Anepersica\" title=\"Bug reports\">\ud83d\udc1b</a></td>\n      <td align=\"center\" valign=\"top\" width=\"14.28%\"><a href=\"http://spenhouet.com\"><img src=\"https://avatars.githubusercontent.com/u/7819068?v=4?s=100\" width=\"100px;\" alt=\"Sebastian Penhouet\"/><br /><sub><b>Sebastian Penhouet</b></sub></a><br /><a href=\"#ideas-Spenhouet\" title=\"Ideas, Planning, & Feedback\">\ud83e\udd14</a></td>\n    </tr>\n    <tr>\n      <td align=\"center\" valign=\"top\" width=\"14.28%\"><a href=\"https://github.com/Bigsealion\"><img src=\"https://avatars.githubusercontent.com/u/23148550?v=4?s=100\" width=\"100px;\" alt=\"Bigsealion\"/><br /><sub><b>Bigsealion</b></sub></a><br /><a href=\"https://github.com/fepegar/torchio/issues?q=author%3ABigsealion\" title=\"Bug reports\">\ud83d\udc1b</a></td>\n      <td align=\"center\" valign=\"top\" width=\"14.28%\"><a href=\"https://www.kitware.com/dzenan-zukic/\"><img src=\"https://avatars.githubusercontent.com/u/1792121?v=4?s=100\" width=\"100px;\" alt=\"D\u017eenan Zuki\u0107\"/><br /><sub><b>D\u017eenan Zuki\u0107</b></sub></a><br /><a href=\"https://github.com/fepegar/torchio/pulls?q=is%3Apr+reviewed-by%3Adzenanz\" title=\"Reviewed Pull Requests\">\ud83d\udc40</a></td>\n      <td align=\"center\" valign=\"top\" width=\"14.28%\"><a href=\"https://github.com/vasl12\"><img src=\"https://avatars.githubusercontent.com/u/15161465?v=4?s=100\" width=\"100px;\" alt=\"vasl12\"/><br /><sub><b>vasl12</b></sub></a><br /><a href=\"#tutorial-vasl12\" title=\"Tutorials\">\u2705</a> <a href=\"https://github.com/fepegar/torchio/issues?q=author%3Avasl12\" title=\"Bug reports\">\ud83d\udc1b</a></td>\n      <td align=\"center\" valign=\"top\" width=\"14.28%\"><a href=\"http://perso.telecom-bretagne.eu/francoisrousseau\"><img src=\"https://avatars.githubusercontent.com/u/398895?v=4?s=100\" width=\"100px;\" alt=\"Fran\u00e7ois Rousseau\"/><br /><sub><b>Fran\u00e7ois Rousseau</b></sub></a><br /><a href=\"https://github.com/fepegar/torchio/issues?q=author%3Arousseau\" title=\"Bug reports\">\ud83d\udc1b</a></td>\n      <td align=\"center\" valign=\"top\" width=\"14.28%\"><a href=\"https://github.com/snavalm\"><img src=\"https://avatars.githubusercontent.com/u/35732360?v=4?s=100\" width=\"100px;\" alt=\"snavalm\"/><br /><sub><b>snavalm</b></sub></a><br /><a href=\"https://github.com/fepegar/torchio/commits?author=snavalm\" title=\"Code\">\ud83d\udcbb</a></td>\n      <td align=\"center\" valign=\"top\" width=\"14.28%\"><a href=\"http://jcreinhold.com\"><img src=\"https://avatars.githubusercontent.com/u/5241441?v=4?s=100\" width=\"100px;\" alt=\"Jacob Reinhold\"/><br /><sub><b>Jacob Reinhold</b></sub></a><br /><a href=\"https://github.com/fepegar/torchio/commits?author=jcreinhold\" title=\"Code\">\ud83d\udcbb</a></td>\n      <td align=\"center\" valign=\"top\" width=\"14.28%\"><a href=\"https://github.com/Hsuxu\"><img src=\"https://avatars.githubusercontent.com/u/15630477?v=4?s=100\" width=\"100px;\" alt=\"Hsu\"/><br /><sub><b>Hsu</b></sub></a><br /><a href=\"https://github.com/fepegar/torchio/issues?q=author%3AHsuxu\" title=\"Bug reports\">\ud83d\udc1b</a></td>\n    </tr>\n    <tr>\n      <td align=\"center\" valign=\"top\" width=\"14.28%\"><a href=\"https://github.com/snipdome\"><img src=\"https://avatars.githubusercontent.com/u/72035308?v=4?s=100\" width=\"100px;\" alt=\"snipdome\"/><br /><sub><b>snipdome</b></sub></a><br /><a href=\"https://github.com/fepegar/torchio/issues?q=author%3Asnipdome\" title=\"Bug reports\">\ud83d\udc1b</a></td>\n      <td align=\"center\" valign=\"top\" width=\"14.28%\"><a href=\"https://github.com/iamSmallY\"><img src=\"https://avatars.githubusercontent.com/u/45689960?v=4?s=100\" width=\"100px;\" alt=\"SmallY\"/><br /><sub><b>SmallY</b></sub></a><br /><a href=\"https://github.com/fepegar/torchio/issues?q=author%3AiamSmallY\" title=\"Bug reports\">\ud83d\udc1b</a></td>\n      <td align=\"center\" valign=\"top\" width=\"14.28%\"><a href=\"https://github.com/guigautier\"><img 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alt=\"\uc591\ud604\uc2dd\"/><br /><sub><b>\uc591\ud604\uc2dd</b></sub></a><br /><a href=\"https://github.com/fepegar/torchio/commits?author=hsyang1222\" title=\"Code\">\ud83d\udcbb</a></td>\n      <td align=\"center\" valign=\"top\" width=\"14.28%\"><a href=\"https://github.com/nicoloesch\"><img src=\"https://avatars.githubusercontent.com/u/70891565?v=4?s=100\" width=\"100px;\" alt=\"nicoloesch\"/><br /><sub><b>nicoloesch</b></sub></a><br /><a href=\"https://github.com/fepegar/torchio/commits?author=nicoloesch\" title=\"Code\">\ud83d\udcbb</a> <a href=\"https://github.com/fepegar/torchio/issues?q=author%3Anicoloesch\" title=\"Bug reports\">\ud83d\udc1b</a></td>\n      <td align=\"center\" valign=\"top\" width=\"14.28%\"><a href=\"https://github.com/vedal\"><img src=\"https://avatars.githubusercontent.com/u/22004000?v=4?s=100\" width=\"100px;\" alt=\"Amund Vedal\"/><br /><sub><b>Amund Vedal</b></sub></a><br /><a href=\"https://github.com/fepegar/torchio/commits?author=vedal\" 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Contributions of any kind welcome!\n",
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TorchIO contributors
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