tstrait


Nametstrait JSON
Version 0.1.0 PyPI version JSON
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home_pagehttps://tskit.dev/tstrait/
SummaryQuantitative trait simulation of tree sequence data
upload_time2024-03-11 14:20:09
maintainerTskit Developers
docs_urlNone
author
requires_python>=3.8
licenseMIT
keywords gwas population genetics quantitative trait simulation statistical genetics tree sequence tskit
VCS
bugtrack_url
requirements No requirements were recorded.
Travis-CI No Travis.
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            # tstrait

**tstrait** is a quantitative trait simulator of [tskit](https://tskit.readthedocs.io/) tree sequences.

- Documentation: https://tskit.dev/tstrait/docs/
- Source code: https://github.com/tskit-dev/tstrait
- Tree sequence documentation: https://tskit.dev/learn/

It provides:
- Simulation of quantitative traits
- Simulation of genetic effect sizes from various distributions
- Simulation of pleiotropic phenotypes
- Simulation of environmental noise
- Computation of individual genetic values given the effect sizes of causal mutations

            

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