| Name | Version | Summary | date |
| sequifier |
0.3.1.8 |
Train a transformer model with the command line |
2024-09-19 16:39:07 |
| pyfamsa |
0.5.2 |
Cython bindings and Python interface to FAMSA, an algorithm for ultra-scale multiple sequence alignments. |
2024-09-19 15:06:51 |
| peptides |
0.3.4 |
Physicochemical properties, indices and descriptors for amino-acid sequences. |
2024-09-09 11:51:45 |
| decombinator |
5.0.0.dev0 |
A fast and efficient tool for the analysis of T-cell receptor repertoire sequences produced by deep sequencing. |
2024-08-29 12:26:20 |
| pytrimal |
0.8.0 |
Cython bindings and Python interface to trimAl, a tool for automated alignment trimming. |
2024-08-28 14:26:57 |
| rnajena-sugar |
0.3.0 |
A Python framework for bioinformatics |
2024-08-23 11:49:51 |
| django-sequencefield |
1.0.12 |
Additional field from django taking it's value from a postgresql sequence. It is similar to django AutoField, except that multiple model can share ids from a single sequence. Also add the possibility to generate an id from a sequence AND from the data of another field in the model |
2024-08-22 05:38:30 |
| refget |
0.6.0 |
Python client for refget |
2024-08-09 02:27:58 |
| pyhmmer |
0.10.14 |
Cython bindings and Python interface to HMMER3. |
2024-07-16 12:41:53 |
| lazystuff |
1.0.2 |
Lazy-ish list-like objects for streaming APIs. |
2024-07-05 13:36:49 |
| scoring-matrices |
0.2.2 |
Dependency free, Cython-compatible scoring matrices to use with biological sequences. |
2024-06-24 10:43:34 |
| batcharray |
0.0.3 |
Functions to manipulate NumPy arrays |
2024-06-20 00:40:31 |
| pymemesuite |
0.1.0a3 |
Cython bindings and Python interface to the MEME suite. |
2024-06-14 11:49:37 |
| batchtensor |
0.0.4 |
Functions to manipulate batches of PyTorch tensors |
2024-05-29 04:16:53 |
| SeqBox |
0.0.2 |
seq tools box. |
2024-05-23 06:14:46 |
| pytantan |
0.1.1 |
Cython bindings and Python interface to Tantan, a fast method for identifying repeats in DNA and protein sequences. |
2024-05-15 09:53:14 |
| pyswrd |
0.2.0 |
Cython bindings and Python interface to SWORD (Smith Waterman On Reduced Database), a heuristic method for fast database search. |
2024-05-15 09:35:01 |
| pyopal |
0.6.0 |
Cython bindings and Python interface to Opal, a SIMD-accelerated pairwise aligner. |
2024-05-08 16:37:52 |
| zignal |
0.7.0 |
Audio signal processing library |
2024-05-02 07:56:35 |
| protkit |
0.2.4 |
A unified toolkit for structural protein engineering. |
2024-04-23 13:52:20 |