| Name | Version | Summary | date |
| biometal-rs |
1.3.0 |
ARM-native bioinformatics library with streaming architecture and evidence-based optimization |
2025-11-09 19:38:04 |
| Binette |
1.2.1 |
Binette: accurate binning refinement tool to constructs high quality MAGs. |
2025-11-07 10:30:05 |
| gene-id-resolver |
0.1.1 |
Production-grade gene ID conversion tool with comprehensive deprecated gene support |
2025-11-06 23:41:12 |
| gaftools |
1.3.0 |
Toolkit for pangenome alignments |
2025-11-06 14:38:42 |
| DoOR-python-toolkit |
0.1.0 |
Python toolkit for working with the DoOR (Database of Odorant Responses) database |
2025-11-06 01:38:23 |
| flync |
1.0.2 |
FLYNC: lncRNA discovery pipeline for Drosophila melanogaster |
2025-11-05 20:22:39 |
| yacman |
0.9.4 |
A standardized configuration object for reference genome assemblies |
2025-11-05 19:28:40 |
| limma-py |
0.1.0 |
Python implementation of R's limma package for differential expression analysis |
2025-11-05 09:31:03 |
| prseq |
0.0.31 |
Python tools (backed by Rust) for sequence analysis |
2025-11-04 18:45:38 |
| pyncbitk |
0.1.0a5 |
Cython bindings and Python interface to the NCBI C++ Toolkit. |
2025-11-04 16:40:28 |
| omicverse |
1.7.8 |
OmicVerse: A single pipeline for exploring the entire transcriptome universe |
2025-11-03 23:51:44 |
| markdup |
0.0.25 |
Fast, accurate BAM deduplication with intelligent UMI detection and correct fragment detection |
2025-11-03 18:22:50 |
| treesak |
1.51.3 |
BioSAK |
2025-11-03 03:48:02 |
| opr |
0.6 |
OPR: Optimized Primer |
2025-11-02 13:44:52 |
| bwamem |
0.0.44 |
Bindings to bwa aligner |
2025-11-02 08:54:14 |
| biosak |
1.123.8 |
BioSAK |
2025-11-01 15:01:09 |
| lncrnapi |
1.2 |
A CLI tool for predicting lncRNA–Protein interactions using transformer embeddings and CatBoost |
2025-11-01 11:08:42 |
| analysis-runner |
3.2.5 |
Analysis runner to help make analysis results reproducible |
2025-10-31 00:10:14 |
| palamedes |
0.0.10 |
Palamedes: HGVS variants from a sequence alignment |
2025-10-30 20:30:36 |
| IRescue |
1.2.0 |
Uncertainty-aware quantification of transposable elements expression in scRNA-seq |
2025-10-30 11:20:33 |