PyDigger - unearthing stuff about Python


NameVersionSummarydate
geneparse 0.8.2 A suite of parse for genotype formats. 2023-05-19 18:14:24
MetaCHIP 1.10.13 HGT detection pipeline 2023-05-17 23:54:47
bamread 0.0.16 Read bam files quickly into dataframes in Python 2023-05-17 16:43:16
divbrowse 1.1.0 A web application for interactive visualization and analysis of genotypic variant matrices 2023-05-16 11:22:39
magpurify2 1.0.2 Identify and remove contaminants from metagenome-assembled genomes. 2023-05-16 02:58:08
foldingdiff-pytorch 0.0.2 Unofficial implementation of foldingdiff in PyTorch. 2023-05-14 15:41:35
PHASEfilter 1.1.0 Software package to filter variants, SNPs and INDELs, that are present in heterozygous form in phased genomes. 2023-05-05 14:20:25
GenBioX 0.3.1 A Comprehensive Bioinformatics Package for Genome Analysis 2023-05-05 13:35:12
dgenies 1.5.0 Dotplot large Genomes in an Interactive, Efficient and Simple way 2023-05-04 15:31:51
recan 0.5 recan: recombination analysis tool 2023-05-04 08:05:40
airrship 0.1.5 Simulation of B cell receptor repertoires 2023-05-03 10:42:08
combipyroc 0.1.1a0 Find the best combination of biomarkers in case-control experiment 2023-04-28 13:34:11
minimizers 0.1.2 A Python package for extracting minimizers from sequence data 2023-04-26 03:50:22
CodonU 1.0.2 This package is designed for helping in genomic analysis 2023-04-24 07:20:20
q2-dbbact 1.5.0 A qiime2 (https://qiime2.org/) plugin for dbBact (http://dbbact.org) annotations of microbiome experiments 2023-04-19 14:19:22
pyfgaws 0.2.3 Tools and python libraries for working with AWS. 2023-04-19 14:13:21
dbbact-calour 1.15.0 dbbact-calour is a Calour (https://github.com/biocore/calour) interface for dbBact (dbbact.org) 2023-04-19 14:12:11
pyhmmer-arm 0.7.5 Cython bindings and Python interface to HMMER3. 2023-04-19 00:34:24
clumps-ptm 0.0.6 CLUMPS-PTM driver gene discovery using 3D protein structure (Getz Lab). 2023-04-17 14:32:11
seguid_calculator 1.27 Calculates SEGUID, cSEGUID & lSEGUID checksums for biological sequences 2023-04-17 11:19:19
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