| Name | Version | Summary | date |
| oakvar |
2.9.103 |
A genomic variant analysis platform |
2024-04-20 03:19:54 |
| baumeva |
0.6.4 |
Library for the solution of optimization problems with evolution algorithms |
2024-03-07 14:14:51 |
| refget |
0.3.0 |
Python client for refget |
2024-02-23 17:24:31 |
| OGU |
1.5 |
Organelle Genome Utilities |
2024-02-23 08:50:56 |
| tnseq-transit |
3.3.4 |
TRANSIT is a tool for the analysis of Tn-Seq data. It provides an easy to use graphical interface and access to three different analysis methods that allow the user to determine essentiality in a single condition as well as between conditions. |
2024-02-17 00:24:42 |
| cocopye |
0.4.0 |
Feature-based prediction of genome quality indices |
2024-02-15 14:30:41 |
| beditor |
2.0.1 |
A computational workflow for designing libraries of guide RNAs for CRISPR base editing |
2024-02-12 01:45:40 |
| Mutation-Simulator |
3.0.2 |
A tool for simulating random mutations in any genome |
2024-02-07 13:51:46 |
| blobtk |
0.5.3 |
Core utilities for BlobToolKit. |
2024-01-24 11:35:44 |
| pyrodigal |
3.2.2 |
Cython bindings and Python interface to Prodigal, an ORF finder for genomes and metagenomes. |
2024-01-21 01:44:46 |
| CrossMap |
0.7.0 |
CrossMap -- Lift over genomics coordinates between assemblies. |
2024-01-12 03:01:05 |
| interop |
1.3.1 |
The Illumina InterOp libraries are a set of common routines used for reading InterOp metric files produced by Illumina sequencers. These libraries are backwards compatible and capable of supporting prior releases of the software, with one exception: GA systems have been excluded. |
2023-12-15 05:31:00 |
| sphae |
1.31 |
Assembling pure culture phages from both Illumina and Nanopore sequencing technology |
2023-11-30 02:26:41 |
| pyrodigal-gv |
0.3.0 |
A Pyrodigal extension to predict genes in giant viruses and viruses with alternative genetic code. |
2023-11-27 15:28:42 |
| parallel-augustus |
1.0.2 |
Simple wrapper around Augustus to bring faster restitution times |
2023-10-19 10:07:59 |
| pygros |
0.1.2 |
A python package for finding genomic range overlaps |
2023-09-21 13:54:55 |
| triplix |
0.0.4 |
A python package to efficiently process, store and retrieve spatial genomics multi-contact data |
2023-09-17 14:18:57 |
| hchacha |
1.0.5 |
Human CHromosome Accession CHAnge - Convert between different human chromosome naming systems (of the same assembly/version) |
2023-07-22 18:37:15 |
| pyreference |
0.7.5 |
Library for working with reference genomes and gene GTF/GFFs |
2023-07-10 09:21:35 |
| genomepy |
0.16.1 |
Genes and genomes at your fingertips |
2023-06-14 13:37:00 |