| Name | Version | Summary | date |
| oakvar |
2.12.6 |
A genomic variant analysis platform |
2024-12-20 03:42:10 |
| amplicov |
0.3.4 |
script to generate amplicon coverage plot |
2024-12-05 20:59:27 |
| gencube |
0.9.13 |
GenCube enables researchers to search for, download, and unify genome assemblies and diverse types of annotations, and retrieve metadata for sequencing-based experimental data suitable for specific requirements. |
2024-11-25 04:27:47 |
| HiSTra |
1.4.0 |
Spectral translocation detection of HiC matrices. |
2024-11-22 08:57:48 |
| sphae |
1.4.5 |
Assembling pure culture phages from both Illumina and Nanopore sequencing technology |
2024-10-01 03:38:19 |
| refget |
0.6.0 |
Python client for refget |
2024-08-09 02:27:58 |
| pygros |
0.1.4 |
A python package for finding genomic range overlaps |
2024-07-16 02:44:15 |
| interop |
1.3.2 |
The Illumina InterOp libraries are a set of common routines used for reading InterOp metric files produced by Illumina sequencers. These libraries are backwards compatible and capable of supporting prior releases of the software, with one exception: GA systems have been excluded. |
2024-07-15 17:44:13 |
| BioProt |
0.2.0 |
A package for DNA, RNA and protein sequence manipulation |
2024-05-17 11:34:12 |
| beditor |
2.0.1 |
A computational workflow for designing libraries of guide RNAs for CRISPR base editing |
2024-02-12 01:45:40 |
| Mutation-Simulator |
3.0.2 |
A tool for simulating random mutations in any genome |
2024-02-07 13:51:46 |
| parallel-augustus |
1.0.2 |
Simple wrapper around Augustus to bring faster restitution times |
2023-10-19 10:07:59 |
| triplix |
0.0.4 |
A python package to efficiently process, store and retrieve spatial genomics multi-contact data |
2023-09-17 14:18:57 |
| hchacha |
1.0.5 |
Human CHromosome Accession CHAnge - Convert between different human chromosome naming systems (of the same assembly/version) |
2023-07-22 18:37:15 |
| pyreference |
0.7.5 |
Library for working with reference genomes and gene GTF/GFFs |
2023-07-10 09:21:35 |
| genomepy |
0.16.1 |
Genes and genomes at your fingertips |
2023-06-14 13:37:00 |
| btyper3 |
3.4.0 |
In silico taxonomic classification of Bacillus cereus group isolates using assembled genomes |
2023-06-01 14:35:43 |
| transcriptionary |
0.1.1 |
transcript plots |
2023-05-24 22:21:33 |
| hg38genome |
1.0.1 |
Python package hg38 genome annotation |
2023-05-17 13:46:32 |
| PHASEfilter |
1.1.0 |
Software package to filter variants, SNPs and INDELs, that are present in heterozygous form in phased genomes. |
2023-05-05 14:20:25 |