| Name | Version | Summary | date |
| icn3dpy |
3.38.0 |
An IPython interface for embedding iCn3D viewer |
2024-11-12 17:03:44 |
| py3Dmol |
2.4.2 |
An IPython interface for embedding 3Dmol.js views in Jupyter notebooks |
2024-11-08 22:19:23 |
| biobb-flexserv |
5.0.0 |
biobb_flexserv is a BioBB category for biomolecular flexibility studies on protein 3D structures. |
2024-10-23 15:55:59 |
| biobb-flexdyn |
5.0.0 |
biobb_flexdyn is a BioBB category for studies on the conformational landscape of native proteins. |
2024-10-23 15:23:23 |
| pixelgen-pixelator |
0.18.3 |
A command-line tool and library to process and analyze sequencing data from Molecular Pixelation (MPX) assays. |
2024-10-20 12:18:17 |
| ppss |
0.2.0 |
Python Protein Subunit Syntax |
2024-10-18 14:17:11 |
| pypef |
0.3.6 |
A command-line interface (CLI) tool for performing data-driven protein engineering by building machine learning (ML)-trained regression models from sequence variant fitness data (in CSV format) based on different techniques for protein sequence encoding. Next to building pure ML models, "hybrid modeling" is also possible using a blended model optimized for predictive contributions of a statistical and an ML-based prediction. |
2024-09-21 08:43:27 |
| progres |
0.2.7 |
Fast protein structure searching using structure graph embeddings |
2024-09-02 11:48:11 |
| py-packman |
1.4.13 |
A software package for molecular PACKing and Motion ANalysis (PACKMAN) |
2024-07-01 22:55:37 |
| aaanalysis |
1.0.0 |
Python framework for interpretable protein prediction |
2024-07-01 22:37:21 |
| rpg |
2.0.5 |
In silico protein digestion |
2024-06-12 09:11:58 |
| DISPbind |
1.1.0 |
Disorder protein genomic binding analysis toolkit |
2024-05-28 08:36:41 |
| biobb-godmd |
4.2.0 |
Biobb_godmd is a BioBB category for GOdMD tool (protein conformational transitions). |
2024-05-24 10:32:57 |
| BioProt |
0.2.0 |
A package for DNA, RNA and protein sequence manipulation |
2024-05-17 11:34:12 |
| pypdb |
2.4 |
A Python wrapper for the RCSB Protein Data Bank (PDB) API |
2024-05-15 13:54:46 |
| protkit |
0.2.4 |
A unified toolkit for structural protein engineering. |
2024-04-23 13:52:20 |
| stringx |
0.7.5 |
STRING DB API Client |
2024-04-09 23:40:39 |
| sadic |
2.0.0 |
Reimplementation as a python package of the software for Simple Atom Depth Index Calculator (SADIC) |
2024-03-25 14:12:51 |
| cazy-webscraper |
2.3.0.3 |
A tool to automate retrieving data from CAZy, build a local CAZyme SQL database, and throughly interrogating the data. Also, automate retrieving protein data, sequences, EC numbers and structure files for specific datasets in the CAZyme database from UniProt, GenBank and PDB. |
2024-03-25 08:45:28 |
| gradio-molecule3d |
0.0.5 |
Molecule3D custom component to visualize pdb or sdf files using 3Dmol.js |
2024-03-16 19:31:50 |