| Name | Version | Summary | date |
| dogma-data |
0.2.3 |
Data processing for Dogma |
2024-04-09 06:17:46 |
| cellrank |
2.0.4 |
CellRank: dynamics from multi-view single-cell data |
2024-04-08 14:22:09 |
| scripro |
1.1.9 |
Single-cell gene regulation network inference by large-scale data integration Pro |
2024-03-25 07:37:39 |
| pixelgen-pixelator |
0.16.2 |
A command-line tool and library to process and analyze sequencing data from Molecular Pixelation (MPX) assays. |
2024-03-19 12:35:30 |
| demuxEM |
0.1.7.post1 |
demuxEM is the demultiplexing module of Pegasus |
2024-03-15 19:36:19 |
| moscot |
0.3.4 |
Multi-omic single-cell optimal transport tools |
2024-03-13 10:41:17 |
| snapatac2 |
2.6.0 |
SnapATAC2: Single-cell epigenomics analysis pipeline |
2024-03-09 14:48:17 |
| mitea-hires |
0.0.18 |
Infer single-cell and spatial microRNA activity from transcriptomics data |
2024-02-27 16:30:16 |
| SCMeTA |
0.2.6 |
A python package for single-cell metabolism analysis. |
2024-02-26 08:24:31 |
| uce-model |
0.1.4 |
Universal Cell Embedding model for single-cell RNA-seq data |
2024-02-19 22:59:36 |
| cellsnake |
0.2.0.12 |
cellsnake |
2024-02-18 12:07:06 |
| squidpy |
1.4.1 |
Spatial Single Cell Analysis in Python |
2024-02-06 13:04:07 |
| scmail |
1.0.9 |
sc-MAIL: single-cell Maximum-likelihood Ancestral Inference for Lineage-tracing |
2024-01-31 19:29:25 |
| cg-gnn |
0.3.2 |
Train a graph neural network on cell graphs. |
2024-01-18 22:38:40 |
| harmony-pytorch |
0.1.8 |
Pytorch implementation of Harmony algorithm on single-cell sequencing data integration |
2024-01-07 21:36:56 |
| scCASE |
0.2.3 |
|
2023-12-31 07:18:05 |
| scprel |
1.1.11 |
Single-cell data preprocessing for multiple samples. |
2023-11-16 12:45:55 |
| sccross |
1.0.3 |
Single cell multi-omics cross modal generation, multi-omics simulation and perturbation |
2023-11-05 21:44:55 |
| oggmap |
0.0.1 |
extract orthologous maps (short: orthomap) from OrthoFinder output for query species |
2023-10-30 16:52:49 |
| muvi |
0.1.1 |
MuVI: A multi-view latent variable model with domain-informed structured sparsity for integrating noisy feature sets. |
2023-10-23 20:13:29 |