PyDigger - unearthing stuff about Python


NameVersionSummarydate
scvelo 0.3.2 RNA velocity generalized through dynamical modeling 2024-03-17 19:25:47
Curare 0.6.0 Curare: A Customizable and Reproducible Analysis Pipeline for RNA-Seq Experiments 2024-02-27 19:05:00
splicekit 0.5.1 splicekit: comprehensive toolkit for splicing analysis from short-read RNA-seq 2024-02-07 10:19:16
topicvelo 0.0.2 TopicVelo: Dissection and Integration of Bursty Transcriptional Dynamics for Complex Systems 2023-12-12 22:54:16
oncoboxlib 1.3.0 Oncobox collections of libraries 2023-12-04 08:44:54
cospar 0.3.3 CoSpar: integrating state and lineage information for dynamic inference 2023-09-29 02:10:37
chromatinhd 0.0.21 High-definition modeling of (single-cell) chromatin + transcriptomics data 2023-08-05 18:12:03
pyeasyfuse 2.0.3 EasyFuse is a pipeline to detect fusion transcripts from RNA-seq data with high accuracy. 2023-07-20 19:31:05
BTM 1.1.3 Blood Transcription Modules for transcriptomics analysis 2023-07-14 13:43:44
tspex 0.6.3 A Python package for calculating tissue-specificity metrics for gene expression. 2023-07-04 18:02:08
multivelo 0.1.3 Multi-omic extension of single-cell RNA velocity 2023-06-02 20:54:53
unitvelo 0.2.5.2 Temporally unified RNA velocity inference 2023-01-12 07:13:34
pyscenic 0.12.1 Python implementation of the SCENIC pipeline for transcription factor inference from single-cell transcriptomics experiments. 2022-11-21 13:08:21
loompy 3.0.7 Work with Loom files for single-cell RNA-seq data 2022-03-05 08:52:28
velocyto 0.17.17 RNA velocity analysis for single cell RNA-seq data 2019-01-31 14:02:25
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