LAML

Name	LAML JSON
Version	0.0.4 JSON
	download
home_page	None
Summary	LAML: Lineage Analysis via Maximum Likelihood
upload_time	2024-07-22 18:53:09
maintainer	None
docs_url	None
author	['Uyen Mai', 'Gillian Chu', 'Ben Raphael']
requires_python	None
license	GNU General Public License, version 3
keywords	phylogenetics evolution computational maximum-likelihood lineage tracing
VCS
bugtrack_url
requirements	No requirements were recorded.
Travis-CI	No Travis.
coveralls test coverage	No coveralls.

            LAML is a maximum likelihood algorithm under the Probabilistic Mixed-type Missing (PMM) model. Given a lineage tracing experiment character matrix with heterogeneous per-site alphabets and mutation probabilities, LAML will find a maximum likelihood tree topology and estimate branch lengths as well as stochastic dropout and heritable silencing missing data rates.

            

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