| Name | arnie JSON |
| Version |
0.2.2
JSON |
| download |
| home_page | None |
| Summary | A Python utility library to estimate, compare, and reweight RNA energetics across many secondary structure algorithms. |
| upload_time | 2025-01-07 20:10:16 |
| maintainer | None |
| docs_url | None |
| author | None |
| requires_python | >=3.7 |
| license | None |
| keywords |
rna
rna structure prediction
bioinformatics
|
| VCS |
 |
| bugtrack_url |
|
| requirements |
No requirements were recorded.
|
| Travis-CI |
No Travis.
|
| coveralls test coverage |
No coveralls.
|
# arnie
Python API to compute RNA energetics and do structure prediction across multiple secondary structure packages.
## Documentation
[See our full docs.](https://daslab.github.io/arnie)
## Install
`arnie` is [available on PyPI](https://pypi.org/project/arnie/).
`pip install arnie`
## Repo Organization
`src/arnie`: source code for the arnie package.
`docs`: docsify-based markdown documentation for the arnie package.
`tests`: unit tests
`notebooks`: example jupyter notebooks with usage.
`scripts`: scripts for processing sequences in batch.
`parameter_files`: dir of various parameter files for packages, put here out of convenience.
(c) 2024 Leland Stanford Jr University
Authors:
Hannah Wayment-Steele
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