bidskit


Namebidskit JSON
Version 2024.11.22 PyPI version JSON
download
home_pagehttps://github.com/jmtyszka/bidskit
SummaryBIDS curation toolkit
upload_time2024-11-22 19:18:00
maintainerNone
docs_urlNone
authorJulian Michael Tyszka
requires_python<4,>=3.10
licenseNone
keywords neuroimaging mri fmri dicom bids
VCS
bugtrack_url
requirements pydicom numpy setuptools
Travis-CI No Travis.
coveralls test coverage No coveralls.
            # BIDSKIT

Python utilities for converting from DICOM to BIDS neuroimaging formats.

The *bidskit* console command takes a directory tree containing imaging series from one or more subjects (eg T1w MPRAGE, BOLD EPI, Fieldmaps), converts the imaging data to Nifti-1 format with JSON metadata files (sidecars) and populates a directory tree according to the latest BIDS specification.

## Documentation
#### [Installation Instructions](docs/Installation.md)
#### [Quick Start Guide](docs/QuickStart.md)
#### [Useful Features](docs/Features.md)
#### [Flywheel Support](docs/Flywheel.md)

## Bugs and Feature Requests 
Let us know about bugs and feature requests through this repo's
[GitHub Issues](https://github.com/jmtyszka/bidskit/issues) page.

## Related Projects
- [heudiconv](https://github.com/nipy/heudiconv) General purpose heuristic DICOM converter
- [dcm2bids](https://github.com/cbedetti/Dcm2Bids) Christophe Beddetti's DICOM to BIDS converter 

            

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