biometrics


Namebiometrics JSON
Version 0.2.15 PyPI version JSON
download
home_pagehttps://github.com/msk-access/biometrics
SummaryPackage to generate sample based biometrics.
upload_time2024-06-17 10:06:35
maintainerNone
docs_urlNone
authorCharlie Murphy
requires_python>=3.5
licenseApache Software License 2.0
keywords biometrics
VCS
bugtrack_url
requirements networkx numpy pandas plotly pysam pyvcf3 python-dateutil pytz retrying six
Travis-CI No Travis.
coveralls test coverage No coveralls.
            # biometrics

Package to generate sample based biometrics

[![Build Status](https://travis-ci.com/msk-access/biometrics.svg?branch=master)](https://travis-ci.com/msk-access/biometrics) [![PyPi](https://img.shields.io/pypi/v/biometrics.svg?)](https://pypi.python.org/pypi/biometrics)

* Free software: Apache Software License 2.0
* Documentation: https://msk-access.gitbook.io/biometrics/
* GitHub: https://github.com/msk-access/biometrics/

## Installation

From pypi:

`pip install biometrics`

From conda (python v3.6 only):

`conda create -n myenv -c bioconda -c conda-forge -c msk-access python=3.6 biometrics`


=======
History
=======

0.2.15 (2023-06-17)
-------------------

* Fixing Non-ASCII character error by using avg read qual instead of the default value
* Added option -het to include heterozygous sites in the calculation of discordant rate.

0.1.1 (2021-01-07)
------------------

* First release on PyPI.

            

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