ficture

Name	ficture JSON
Version	0.0.4.0 JSON
	download
home_page	None
Summary	Segmentation free factor analysis for sub-micron resolution spatial transcriptomics
upload_time	2024-12-03 10:29:44
maintainer	None
docs_url	None
author	None
requires_python	>=3.9
license	CC BY-NC 4.0
keywords
VCS
bugtrack_url
requirements	Pillow opencv-python dataclasses datetime ete3 geojson geopandas importlib jinja2 joblib kneed matplotlib numpy pandas pypng scipy shapely scikit-learn mpmath
Travis-CI	No Travis.
coveralls test coverage	No coveralls.

            # FICTURE

FICTURE: Scalable segmentation-free analysis of sub-micron resolution spatial transcriptomics

Install 
```
pip install ficture
```

Documentation [https://seqscope.github.io/ficture/](https://seqscope.github.io/ficture/)

[Preprint](https://biorxiv.org/cgi/content/short/2023.11.04.565621v2) (Real data results in the preprint are [available on Zenodo](https://zenodo.org/records/10070621))

For a brief introduction, see [slides used for AGBT talk](http://tinyurl.com/47pbktzp)

            

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