ibd-dendrogram

Name	ibd-dendrogram JSON
Version	0.12.4 JSON
	download
home_page	https://github.com/jtb324/ibd_dendrogram
Summary	module that helps to form a dendrogram
upload_time	2024-01-26 20:45:48
maintainer
docs_url	None
author	jtb
requires_python	>=3.10,<3.11
license
keywords	python dendrogram ibd genetics relatedness
VCS
bugtrack_url
requirements	No requirements were recorded.
Travis-CI	No Travis.
coveralls test coverage	No coveralls.

            [![Code style: black](https://img.shields.io/badge/code%20style-black-000000.svg)](https://github.com/psf/black)
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# ibd-dendrogram:

A python module to help users create a distance matrix and construct a dendrogram using Identity by Descent segments as a distance marker. The default distance is calculated as 1/(shared ibd segment length). Documentation explaining the api can be found here: [ibd-dendrogram docs](https://ibd-dendrogram.readthedocs.io/en/latest/) 

This module has four accessible methods: make_distance_matrix, record_matrix, generate_dendrogram, draw_dendrogram.


            

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