PyDigger - unearthing stuff about Python


NameVersionSummarydate
DendroPy 4.5.1 A Python library for phylogenetics and phylogenetic computing: reading, writing, simulation, processing and manipulation of phylogenetic trees (phylogenies) and characters. 2020-10-24 17:52:25
geonomics 0.0.33 A package for landscape genomic simulation 2020-10-20 17:27:04
pandas-plink 2.2.1 Read PLINK files into Pandas data frames 2020-10-07 23:02:13
seq-dove 0.4.3 Set of tools for downstream vcf analysis 2020-09-25 09:20:49
fastlmm 0.4.11 Fast GWAS 2020-09-23 19:34:09
lineage 3.1.5 tools for genetic genealogy and the analysis of consumer DNA test results 2020-09-20 07:05:29
bgen-reader 4.0.6 Bgen file format reader 2020-09-16 22:30:47
bed-reader 0.1.0 Bed Reader 2020-09-07 02:48:49
pysumstats 0.4.3 Package for working with GWAS summary statistics 2020-09-04 09:42:10
cbgen 0.1.5 Python wrapper around bgen library 2020-09-03 17:57:25
seq-pigeon 0.4.2 Pipeline tool for NGS data 2020-09-02 09:01:16
mop-bam 0.0.2.0 Get well-mapped regions from bams 2020-08-27 21:35:08
VCF-kit 0.2.8 Assorted utilities for the variant call format 2020-08-22 21:55:35
geneparse 0.8.1 A suite of parse for genotype formats. 2020-08-21 20:23:33
epistasis 0.7.4 A Python API for estimating statistical high-order epistasis in genotype-phenotype maps. 2020-07-28 05:31:14
MLG-assign 1.0.3 Application to add MLG 2020-07-17 13:58:55
tcga 0.0.14 Computational biology & bioinformatics utils 2020-07-12 12:40:24
tidy-vcf 0.1.2.3 Make tidy VCF data. 2020-06-09 03:22:42
limix-plot 0.0.1 Plotting library for genetics. 2018-04-10 09:00:33
sisrs 0.1.0 Site Identification from Short Read Sequences. 2018-03-29 02:51:12
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