looper

Name	looper JSON
Version	1.9.1 JSON
	download
home_page	https://github.com/pepkit/looper
Summary	A pipeline submission engine that parses sample inputs and submits pipelines for each sample.
upload_time	2024-07-18 16:55:55
maintainer	None
docs_url	None
author	Nathan Sheffield, Vince Reuter, Michal Stolarczyk, Johanna Klughammer, Andre Rendeiro
requires_python	None
license	BSD2
keywords	bioinformatics sequencing ngs
VCS
bugtrack_url
requirements	No requirements were recorded.
Travis-CI	No Travis.
coveralls test coverage	No coveralls.

            # <img src="docs/img/looper_logo.svg" alt="looper logo" height="70">

![Run pytests](https://github.com/pepkit/looper/workflows/Run%20pytests/badge.svg)
[![PEP compatible](http://pepkit.github.io/img/PEP-compatible-green.svg)](http://pepkit.github.io)
[![Code style: black](https://img.shields.io/badge/code%20style-black-000000.svg)](https://github.com/psf/black)


`Looper` is a pipeline submission engine. The typical use case is to run a bioinformatics pipeline across many different input samples. Instructions are in the [documentation](http://looper.databio.org/).

            

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