PyDigger - unearthing stuff about Python


NameVersionSummarydate
riboSeed 0.3.9 riboSeed: assemble across rDNA regions 2017-05-24 17:09:15
loom-viewer 0.25.2 View .loom files in the browser 2017-05-24 09:56:08
ScaleHD 0.241 Automated DNA micro-satellite genotyping. 2017-05-24 08:03:43
bioinfo_tools 0.0.8 Python library that parses GFF, Fasta files into python classes 2017-05-23 08:54:45
resdk 1.8.2 Resolwe SDK for Python 2017-05-22 19:22:25
NCBITK 1.0a5 A tool kit for accessing NCBI's GenBank 2017-05-19 00:26:32
bio_pype 0.9.9 Managements of tools and easy creation of pipelines in the computerome nodes. 2017-05-17 19:27:57
genetest 0.2.1 A package to process and analyze genotypic and phenotypic data. 2017-05-17 18:50:44
geneparse 0.3.1 A suite of parse for genotype formats. 2017-05-17 18:29:54
multiqc 1.0 Create aggregate bioinformatics analysis reports across many samples and tools 2017-05-17 15:58:49
basepair 0.9.11 Python clint for Basepair's API 2017-05-15 21:20:23
TFBS-footprinting 1.0.0b25 Tool for identifying conserved TFBSs in vertebrate species. 2017-05-14 16:11:11
changeo 0.3.5 A bioinformatics toolkit for processing high-throughput lymphocyte receptor sequencing data. 2017-05-12 15:04:20
BioPandas 0.2.1 Molecular Structures in Pandas DataFrames 2017-05-11 18:42:52
readtagger 0.3.24 Tags reads in a BAM file based on other BAM files. 2017-05-11 09:32:52
hic2cool 0.3.3 Converter between .hic files (from juicer) and single-resolution or multi-resolution .cool files (for cooler). Both hic and cool files describe Hi-C contact matrices. Intended to be lightweight, this can be used as a simple imported package or a stand-alone Python file for command line conversion. 2017-05-10 20:25:07
scikit-MDR 0.4.4 Multifactor Dimensionality Reduction (MDR) 2017-05-10 14:42:57
snp-pipeline 0.8.0 Script and functions for SNP matrix construction 2017-05-09 17:45:51
parephase 0.1.0 Detects phasing of 5'PARE data around stop codons 2017-05-08 02:11:46
gfapy 1.0.0rc10 Library for handling data in the GFA1 and GFA2 formats 2017-05-04 15:22:59