mergesvvcf


Namemergesvvcf JSON
Version 1.0.3 PyPI version JSON
download
home_pagehttps://github.com/papaemmelab/mergeSVvcf
SummaryMerge SV VCF calls. Fork of https://github.com/ljdursi/mergevcf by Jonathan Dursi (Jonathan.Dursi@oicr.on.ca)
upload_time2023-04-05 19:19:09
maintainer
docs_urlNone
authorMax Levine
requires_python
licenseGPL
keywords merge sv vcfs
VCS
bugtrack_url
requirements No requirements were recorded.
Travis-CI No Travis.
coveralls test coverage No coveralls.
            # Merge SV VCFs


This set of routines merges SV VCF files by calls, labeling calls by the callers that
made them in an INFO field, Callers=.   Most of the work goes into normalizing
SV calls, which are treated as paired of breakpoints that are equal if they fall within
a user-specified window.


            

Raw data

            {
    "_id": null,
    "home_page": "https://github.com/papaemmelab/mergeSVvcf",
    "name": "mergesvvcf",
    "maintainer": "",
    "docs_url": null,
    "requires_python": "",
    "maintainer_email": "",
    "keywords": "merge sv vcfs",
    "author": "Max Levine",
    "author_email": "levinem1@mskcc.org",
    "download_url": "https://files.pythonhosted.org/packages/a6/2b/287d29086bc596a04212bffe5131a467e3ca568cc70701369ff7aca3971d/mergesvvcf-1.0.3.tar.gz",
    "platform": null,
    "description": "# Merge SV VCFs\n\n\nThis set of routines merges SV VCF files by calls, labeling calls by the callers that\nmade them in an INFO field, Callers=.   Most of the work goes into normalizing\nSV calls, which are treated as paired of breakpoints that are equal if they fall within\na user-specified window.\n\n",
    "bugtrack_url": null,
    "license": "GPL",
    "summary": "Merge SV VCF calls. Fork of https://github.com/ljdursi/mergevcf by Jonathan Dursi (Jonathan.Dursi@oicr.on.ca)",
    "version": "1.0.3",
    "split_keywords": [
        "merge",
        "sv",
        "vcfs"
    ],
    "urls": [
        {
            "comment_text": "",
            "digests": {
                "blake2b_256": "5618afa188fb7b7c779f376ca26fa28b0b91ae874c2eb781589094a8ca214203",
                "md5": "80baeee82e47a85656d0bb35edfb39e3",
                "sha256": "425daec1358ca9037ff561393c0cf55502c2fbbe88376b913cee12ba3edbd1c3"
            },
            "downloads": -1,
            "filename": "mergesvvcf-1.0.3-cp38-cp38-macosx_10_9_x86_64.whl",
            "has_sig": false,
            "md5_digest": "80baeee82e47a85656d0bb35edfb39e3",
            "packagetype": "bdist_wheel",
            "python_version": "cp38",
            "requires_python": null,
            "size": 188789,
            "upload_time": "2023-04-05T19:19:07",
            "upload_time_iso_8601": "2023-04-05T19:19:07.279267Z",
            "url": "https://files.pythonhosted.org/packages/56/18/afa188fb7b7c779f376ca26fa28b0b91ae874c2eb781589094a8ca214203/mergesvvcf-1.0.3-cp38-cp38-macosx_10_9_x86_64.whl",
            "yanked": false,
            "yanked_reason": null
        },
        {
            "comment_text": "",
            "digests": {
                "blake2b_256": "a62b287d29086bc596a04212bffe5131a467e3ca568cc70701369ff7aca3971d",
                "md5": "3f04a20201749d6bc2e0b66f1a248fa7",
                "sha256": "ae0d8e187abb0695106f905f6855751e6e24188eb4fdfaf6ca7890ddf0b51e28"
            },
            "downloads": -1,
            "filename": "mergesvvcf-1.0.3.tar.gz",
            "has_sig": false,
            "md5_digest": "3f04a20201749d6bc2e0b66f1a248fa7",
            "packagetype": "sdist",
            "python_version": "source",
            "requires_python": null,
            "size": 219061,
            "upload_time": "2023-04-05T19:19:09",
            "upload_time_iso_8601": "2023-04-05T19:19:09.818833Z",
            "url": "https://files.pythonhosted.org/packages/a6/2b/287d29086bc596a04212bffe5131a467e3ca568cc70701369ff7aca3971d/mergesvvcf-1.0.3.tar.gz",
            "yanked": false,
            "yanked_reason": null
        }
    ],
    "upload_time": "2023-04-05 19:19:09",
    "github": true,
    "gitlab": false,
    "bitbucket": false,
    "github_user": "papaemmelab",
    "github_project": "mergeSVvcf",
    "travis_ci": false,
    "coveralls": false,
    "github_actions": false,
    "lcname": "mergesvvcf"
}
        
Elapsed time: 0.05074s