multiqc

Name	multiqc JSON
Version	1.20 JSON
	download
home_page	http://multiqc.info
Summary	Create aggregate bioinformatics analysis reports across many samples and tools
upload_time	2024-02-12 13:00:41
maintainer
docs_url	None
author	Phil Ewels
requires_python
license	GPLv3
keywords	bioinformatics biology sequencing ngs next generation sequencing quality control
VCS
bugtrack_url
requirements	No requirements were recorded.
Travis-CI	No Travis.
coveralls test coverage	No coveralls.

            
MultiQC is a tool to aggregate bioinformatics results across many samples into a single report. It is written in Python and contains modules for a large number of common bioinformatics tools.

You can install MultiQC from PyPI as follows::

    pip install multiqc

Then it's just a case of going to your analysis directory and running the script::

    multiqc .

MultiQC will scan the specified directory (:code:`'.'` is the current dir) and produce a report detailing whatever it finds.

The report is created in :code:`multiqc_report.html` by default. Tab-delimited data files are created in :code:`multiqc_data/` to give easy access for downstream processing.

For more detailed instructions, run :code:`multiqc -h`

See the MultiQC website for documentation and tutorial videos: http://multiqc.info

MultiQC was written by Phil Ewels (http://phil.ewels.co.uk) at Seqera Labs (https://seqera.io/), originally at SciLifeLab Sweden (http://www.scilifelab.se)

            

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