| Name | pbiotools JSON |
| Version |
4.0.2
JSON |
| download |
| home_page | |
| Summary | Miscellaneous bioinformatics and other supporting utilities for Python 3 |
| upload_time | 2023-09-12 09:00:12 |
| maintainer | |
| docs_url | None |
| author | Brandon Malone |
| requires_python | <3.11,>=3.7 |
| license | MIT |
| keywords |
bioinformatics
riboseq
|
| VCS |
 |
| bugtrack_url |
|
| requirements |
No requirements were recorded.
|
| Travis-CI |
No Travis.
|
| coveralls test coverage |
No coveralls.
|
# pbiotools [](http://bioconda.github.io/recipes/pbiotools/README.html) [](https://pypi.org/project/pbiotools) [](https://github.com/dieterich-lab/pbiotools/actions/workflows/ci.yml)
The **pbiotools** package provides miscellaneous bioinformatics and other utilities for Python 3. It is required for the installation of [Rp-Bp](https://github.com/dieterich-lab/rp-bp).
## Installation
If required, set up the conda channels as described [here](https://bioconda.github.io/#usage), and install with
```
conda install pbiotools
```
The package is also available on [PyPI](https://pypi.org/project/pbiotools/).
You can also get a container with **pbiotools** pre-installed
```
# docker or...
docker pull quay.io/biocontainers/pbiotools:<tag>
# ... singularity
singularity pull pbiotools.sif docker://quay.io/biocontainers/pbiotools:<tag>
```
There is no _latest_ tag, you need to specify the version tag. See [pbiotools/tags](https://quay.io/repository/biocontainers/pbiotools?tab=tags) for valid values for `<tag>`.
## Documentation
There is currently limited [documentation](docs/usage-instructions.md).
## How to report issues
Bugs and issues should be reported in the [bug tracker](https://github.com/dieterich-lab/pbiotools/issues). Follow the instructions and guidelines given in the template.
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