[![Language][language-badge]][language-link]
[![Code Style][code-style-badge]][code-style-link]
[![Type Checked][type-checking-badge]][type-checking-link]
[![PEP8][pep-8-badge]][pep-8-link]
[![Code Coverage][code-coverage-badge]][code-coverage-link]
[![License][license-badge]][license-link]
---
[![Python package][python-package-badge]][python-package-link]
[![PyPI version][pypi-badge]][pypi-link]
[![PyPI download total][pypi-downloads-badge]][pypi-downloads-link]
---
[language-badge]: http://img.shields.io/badge/language-python-brightgreen.svg
[language-link]: http://www.python.org/
[code-style-badge]: https://img.shields.io/badge/code%20style-black-000000.svg
[code-style-link]: https://black.readthedocs.io/en/stable/
[type-checking-badge]: http://www.mypy-lang.org/static/mypy_badge.svg
[type-checking-link]: http://mypy-lang.org/
[pep-8-badge]: https://img.shields.io/badge/code%20style-pep8-brightgreen.svg
[pep-8-link]: https://www.python.org/dev/peps/pep-0008/
[code-coverage-badge]: https://codecov.io/gh/fulcrumgenomics/pyfgaws/branch/main/graph/badge.svg
[code-coverage-link]: https://codecov.io/gh/fulcrumgenomics/pyfgaws
[license-badge]: http://img.shields.io/badge/license-MIT-blue.svg
[license-link]: https://github.com/fulcrumgenomics/pyfgaws/blob/main/LICENSE
[python-package-badge]: https://github.com/fulcrumgenomics/pyfgaws/workflows/Python%20package/badge.svg
[python-package-link]: https://github.com/fulcrumgenomics/pyfgaws/actions?query=workflow%3A%22Python+package%22
[pypi-badge]: https://badge.fury.io/py/pyfgaws.svg
[pypi-link]: https://pypi.python.org/pypi/pyfgaws
[pypi-downloads-badge]: https://img.shields.io/pypi/dm/pyfgaws
[pypi-downloads-link]: https://pypi.python.org/pypi/pyfgaws
# pyfgaws
`pip install pyfgaws`
**Requires python 3.8**
# Getting Setup
Conda is used to install a specific version of python and [poetry][poetry-link]
which is then used to manage the python development environment. If not already installed, install
[miniconda from the latest platform-appropriate installer](miniconda-link). Then run:
```
conda create -n pyfgaws -c conda-forge -c bioconda --file conda-requirements.txt
```
Then activate the new environment and install the toolkit:
```
conda activate pyfgaws
poetry install
```
[miniconda-link]: https://docs.conda.io/en/latest/miniconda.html
[poetry-link]: https://github.com/python-poetry/poetry
Raw data
{
"_id": null,
"home_page": "https://github.com/fulcrumgenomics/pyfgaws",
"name": "pyfgaws",
"maintainer": "",
"docs_url": null,
"requires_python": ">=3.8,<4.0",
"maintainer_email": "",
"keywords": "aws,bioinformatics",
"author": "Nils Homer",
"author_email": "",
"download_url": "https://files.pythonhosted.org/packages/52/5c/d2ee0ade79a89bcc788b47ec30d6d76c66443029268782f03847137d6c2d/pyfgaws-0.2.3.tar.gz",
"platform": null,
"description": "\n[![Language][language-badge]][language-link]\n[![Code Style][code-style-badge]][code-style-link]\n[![Type Checked][type-checking-badge]][type-checking-link]\n[![PEP8][pep-8-badge]][pep-8-link]\n[![Code Coverage][code-coverage-badge]][code-coverage-link]\n[![License][license-badge]][license-link]\n\n---\n\n[![Python package][python-package-badge]][python-package-link]\n[![PyPI version][pypi-badge]][pypi-link]\n[![PyPI download total][pypi-downloads-badge]][pypi-downloads-link]\n\n---\n\n[language-badge]: http://img.shields.io/badge/language-python-brightgreen.svg\n[language-link]: http://www.python.org/\n[code-style-badge]: https://img.shields.io/badge/code%20style-black-000000.svg\n[code-style-link]: https://black.readthedocs.io/en/stable/ \n[type-checking-badge]: http://www.mypy-lang.org/static/mypy_badge.svg\n[type-checking-link]: http://mypy-lang.org/\n[pep-8-badge]: https://img.shields.io/badge/code%20style-pep8-brightgreen.svg\n[pep-8-link]: https://www.python.org/dev/peps/pep-0008/\n[code-coverage-badge]: https://codecov.io/gh/fulcrumgenomics/pyfgaws/branch/main/graph/badge.svg\n[code-coverage-link]: https://codecov.io/gh/fulcrumgenomics/pyfgaws\n[license-badge]: http://img.shields.io/badge/license-MIT-blue.svg\n[license-link]: https://github.com/fulcrumgenomics/pyfgaws/blob/main/LICENSE\n[python-package-badge]: https://github.com/fulcrumgenomics/pyfgaws/workflows/Python%20package/badge.svg\n[python-package-link]: https://github.com/fulcrumgenomics/pyfgaws/actions?query=workflow%3A%22Python+package%22\n[pypi-badge]: https://badge.fury.io/py/pyfgaws.svg\n[pypi-link]: https://pypi.python.org/pypi/pyfgaws\n[pypi-downloads-badge]: https://img.shields.io/pypi/dm/pyfgaws\n[pypi-downloads-link]: https://pypi.python.org/pypi/pyfgaws\n\n# pyfgaws\n\n`pip install pyfgaws`\n\n**Requires python 3.8**\n\n# Getting Setup\n\nConda is used to install a specific version of python and [poetry][poetry-link]\nwhich is then used to manage the python development environment. If not already installed, install \n[miniconda from the latest platform-appropriate installer](miniconda-link). Then run:\n\n```\nconda create -n pyfgaws -c conda-forge -c bioconda --file conda-requirements.txt\n```\n\nThen activate the new environment and install the toolkit:\n\n```\nconda activate pyfgaws\npoetry install\n```\n\n[miniconda-link]: https://docs.conda.io/en/latest/miniconda.html\n[poetry-link]: https://github.com/python-poetry/poetry\n",
"bugtrack_url": null,
"license": "MIT",
"summary": "Tools and python libraries for working with AWS.",
"version": "0.2.3",
"split_keywords": [
"aws",
"bioinformatics"
],
"urls": [
{
"comment_text": "",
"digests": {
"blake2b_256": "642c9e88a5dde5ae0aad92f044924d34407b29e72086cc7720d7d87dde112fb0",
"md5": "09a7482f8a9febf7d7c7d36a1d7a9a19",
"sha256": "7702f1ec9ee8ef7d831b508ae0732a71a3691687ef00513ac9eed4abb36450bd"
},
"downloads": -1,
"filename": "pyfgaws-0.2.3-py3-none-any.whl",
"has_sig": false,
"md5_digest": "09a7482f8a9febf7d7c7d36a1d7a9a19",
"packagetype": "bdist_wheel",
"python_version": "py3",
"requires_python": ">=3.8,<4.0",
"size": 22859,
"upload_time": "2023-04-19T14:13:20",
"upload_time_iso_8601": "2023-04-19T14:13:20.055043Z",
"url": "https://files.pythonhosted.org/packages/64/2c/9e88a5dde5ae0aad92f044924d34407b29e72086cc7720d7d87dde112fb0/pyfgaws-0.2.3-py3-none-any.whl",
"yanked": false,
"yanked_reason": null
},
{
"comment_text": "",
"digests": {
"blake2b_256": "525cd2ee0ade79a89bcc788b47ec30d6d76c66443029268782f03847137d6c2d",
"md5": "f175ad30b6f5cadbed47a5c66cc354a0",
"sha256": "2cf1a08e6a839593f1246cf83314c76cb90375328d83cb5568b004d306a8b1ea"
},
"downloads": -1,
"filename": "pyfgaws-0.2.3.tar.gz",
"has_sig": false,
"md5_digest": "f175ad30b6f5cadbed47a5c66cc354a0",
"packagetype": "sdist",
"python_version": "source",
"requires_python": ">=3.8,<4.0",
"size": 18122,
"upload_time": "2023-04-19T14:13:21",
"upload_time_iso_8601": "2023-04-19T14:13:21.953988Z",
"url": "https://files.pythonhosted.org/packages/52/5c/d2ee0ade79a89bcc788b47ec30d6d76c66443029268782f03847137d6c2d/pyfgaws-0.2.3.tar.gz",
"yanked": false,
"yanked_reason": null
}
],
"upload_time": "2023-04-19 14:13:21",
"github": true,
"gitlab": false,
"bitbucket": false,
"github_user": "fulcrumgenomics",
"github_project": "pyfgaws",
"travis_ci": false,
"coveralls": false,
"github_actions": true,
"lcname": "pyfgaws"
}