## Citation
If you use Staphscope Typing Tool in your research, please cite it as:
Brown, B. (2025). Staphscope Typing Tool: Unified MLST + spa + SCCmec typing for Staphylococcus aureus. GitHub repository. https://github.com/bbeckley-hub/staphscope-typing-tool
# Staphscope Typing Tool
A unified MLST + spa + SCCmec typing tool for *Staphylococcus aureus*.
## Features
- Multi-locus sequence typing (MLST)
- spa typing
- SCCmec typing using CGE SCCmecFinder
- Parallel processing for high-throughput analysis
- Comprehensive reporting in multiple formats
## Installation
### Using Conda (Recommended)
```bash
conda install -c bioconda staphscope-typing-tool
Raw data
{
"_id": null,
"home_page": "https://github.com/bbeckley-hub/staphscope-typing-tool",
"name": "staphscope-typing-tool",
"maintainer": null,
"docs_url": null,
"requires_python": "<4,>=3.6",
"maintainer_email": null,
"keywords": "bioinformatics, microbiology, staphylococcus, typing, mlst, spa, sccmec",
"author": "Beckley Brown",
"author_email": "brownbeckley94@gmail.com",
"download_url": "https://files.pythonhosted.org/packages/32/68/5670b058a4d8cb20e41c317ebd7d5be226bc47da19a99f99e3f0cb14ef0d/staphscope_typing_tool-0.1.0.tar.gz",
"platform": null,
"description": "## Citation\n\nIf you use Staphscope Typing Tool in your research, please cite it as:\n\nBrown, B. (2025). Staphscope Typing Tool: Unified MLST + spa + SCCmec typing for Staphylococcus aureus. GitHub repository. https://github.com/bbeckley-hub/staphscope-typing-tool\n\n# Staphscope Typing Tool\n\nA unified MLST + spa + SCCmec typing tool for *Staphylococcus aureus*.\n\n## Features\n\n- Multi-locus sequence typing (MLST)\n- spa typing\n- SCCmec typing using CGE SCCmecFinder\n- Parallel processing for high-throughput analysis\n- Comprehensive reporting in multiple formats\n\n## Installation\n\n### Using Conda (Recommended)\n```bash\nconda install -c bioconda staphscope-typing-tool\n",
"bugtrack_url": null,
"license": null,
"summary": "Staphscope Typing Tool \u2014 MLST + spa + SCCmec typing for Staphylococcus aureus",
"version": "0.1.0",
"project_urls": {
"Bug Reports": "https://github.com/bbeckley-hub/staphscope-typing-tool/issues",
"Homepage": "https://github.com/bbeckley-hub/staphscope-typing-tool",
"Source": "https://github.com/bbeckley-hub/staphscope-typing-tool"
},
"split_keywords": [
"bioinformatics",
" microbiology",
" staphylococcus",
" typing",
" mlst",
" spa",
" sccmec"
],
"urls": [
{
"comment_text": null,
"digests": {
"blake2b_256": "4046f385b8824584b8248915cb24486c50f15af50cf68faac24ad052ae11eb66",
"md5": "6592d99854f21901b2f459b1b2e076ca",
"sha256": "ebac5efc10c9daf867d0e7b8a35df293c4830302ee6a9258149e55cd80d7c22e"
},
"downloads": -1,
"filename": "staphscope_typing_tool-0.1.0-py3-none-any.whl",
"has_sig": false,
"md5_digest": "6592d99854f21901b2f459b1b2e076ca",
"packagetype": "bdist_wheel",
"python_version": "py3",
"requires_python": "<4,>=3.6",
"size": 9211,
"upload_time": "2025-08-19T12:54:25",
"upload_time_iso_8601": "2025-08-19T12:54:25.462224Z",
"url": "https://files.pythonhosted.org/packages/40/46/f385b8824584b8248915cb24486c50f15af50cf68faac24ad052ae11eb66/staphscope_typing_tool-0.1.0-py3-none-any.whl",
"yanked": false,
"yanked_reason": null
},
{
"comment_text": null,
"digests": {
"blake2b_256": "32685670b058a4d8cb20e41c317ebd7d5be226bc47da19a99f99e3f0cb14ef0d",
"md5": "a793206faa1be009f8d6a993987d9943",
"sha256": "ed4ea8fd2ddba42cb86342dac5d5a5b48d99f65de7520657c2dd9bb86d66022f"
},
"downloads": -1,
"filename": "staphscope_typing_tool-0.1.0.tar.gz",
"has_sig": false,
"md5_digest": "a793206faa1be009f8d6a993987d9943",
"packagetype": "sdist",
"python_version": "source",
"requires_python": "<4,>=3.6",
"size": 8555,
"upload_time": "2025-08-19T12:54:26",
"upload_time_iso_8601": "2025-08-19T12:54:26.852894Z",
"url": "https://files.pythonhosted.org/packages/32/68/5670b058a4d8cb20e41c317ebd7d5be226bc47da19a99f99e3f0cb14ef0d/staphscope_typing_tool-0.1.0.tar.gz",
"yanked": false,
"yanked_reason": null
}
],
"upload_time": "2025-08-19 12:54:26",
"github": true,
"gitlab": false,
"bitbucket": false,
"codeberg": false,
"github_user": "bbeckley-hub",
"github_project": "staphscope-typing-tool",
"travis_ci": false,
"coveralls": false,
"github_actions": true,
"lcname": "staphscope-typing-tool"
}
JSON
