starstack

Name	starstack JSON
Version	0.2.7 JSON
	download
home_page	https://github.com/rsanchezgarc/starstack
Summary	A relion star mrcs stack class
upload_time	2024-08-01 23:30:27
maintainer	None
docs_url	None
author	Ruben Sanchez Garcia
requires_python	None
license	None
keywords	relion cryoem star stack mrcs
VCS
bugtrack_url
requirements	mrcfile numpy pandas requests starfile
Travis-CI	No Travis.
coveralls test coverage	No coveralls.

            ## starstack: CryoEM Particle stars and stack Management in Python


# Overview
The ParticlesStarSet class provides an efficient way to manage a set of particles in cryo-electron microscopy (cryoEM). 
It allows for easy reading and manipulation of STAR files and associated .mrcs image stacks. 
The library also offers utilities for creating subsets and saving them back to disk.

# Features

Read STAR files and associated .mrcs particle stacks.
Create new STAR files and .mrcs particle stacks.
Support for creating subsets of particles.
Support for particle stack file handling.

# Dependencies
mrcfile
numpy
pandas
starfile

# Installation
pip install git+https://github.com/rsanchezgarc/starstack

# Usage
Reading STAR Files

```
from starstack import ParticlesStarSet
pset = ParticlesStarSet("my_file.star", particlesDir="Particles/")
```

            

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