| Name | Version | Summary | date |
| mdeq |
2025.6.30 |
mdeq: mutation disequilibrium analysis tools. |
2025-08-13 07:11:57 |
| virheat |
0.7.6 |
virHEAT creates a heatmap from vcf files and maps positions on to a reference genome. |
2025-08-12 12:41:10 |
| ensembl-tui |
0.4.3 |
Ensembl terminal user interface tools |
2025-08-12 05:30:48 |
| cogent3 |
2025.7.10a7 |
COmparative GENomics Toolkit 3: genomic sequence analysis within notebooks or on compute systems with 1000s of CPUs. |
2025-08-11 02:30:25 |
| radiate |
0.0.6 |
A fast and flexible evolution engine for implementing artificial evolution and genetic programming techniques. |
2025-08-10 21:06:10 |
| iceberg-evolve |
1.0.1 |
Schema diffing and evolution tool for Iceberg and beyond. |
2025-08-07 08:28:21 |
| agix |
1.3.0 |
Experimental AGI framework with neuro-symbolic reasoning, evolutionary agents and plastic learning |
2025-08-03 09:14:01 |
| x-transformers-rl |
0.0.98 |
X-Transformer for RL |
2025-08-02 17:55:29 |
| phylim |
2025.7.30 |
A library for checking the limits of phylogenetic tree estimation. |
2025-07-30 06:46:48 |
| geo-optimizer |
1.1.0 |
GEO: Genetic & Evolutionary Optimizer — A Neural Network Training framework. |
2025-07-25 12:36:18 |
| qmemetic-ai |
1.1.2 |
Quantum-inspired AI system for evolving, mutating, and entangling memes across users, systems, and timelines |
2025-07-21 07:29:00 |
| mutation-motif |
2025.7.17 |
mutation_motif, software for analyses of point mutations, see https://www.ncbi.nlm.nih.gov/pubmed/27974498 |
2025-07-16 23:25:09 |
| pepflex |
0.0.1 |
A modular framework for in silico peptide screening and evolution. |
2025-07-13 17:41:22 |
| cogent3-h5seqs |
0.5.0 |
HDF5 storage driver for cogent3 sequence collections |
2025-07-10 06:30:06 |
| spyceATAC |
0.0.4 |
sPYce is a Python package for the cross-species integration of single-nucleus ATAC-seq data (snATAC-seq) |
2025-07-09 14:19:12 |
| phenopype |
6.1.0 |
A phenotyping pipeline for python |
2025-02-03 23:13:53 |
| phenopype-plugins |
0.2.0 |
AI and other plugins for phenopype |
2025-02-03 03:17:34 |
| virusrecom |
1.3.7 |
An information-theory-based method for recombination detection of viral lineages. |
2025-01-21 13:04:51 |
| diverse-seq |
2024.12.26a1 |
diverse_seq: a tool for sampling diverse biological sequences |
2024-12-26 03:33:53 |
| gadma |
2.0.2 |
A tool for easy-to-use demographic inference |
2024-11-06 16:25:51 |