| Name | Version | Summary | date |
| omicscope |
1.4.6 |
OmicScope: from quantitative proteomics to systems biology. |
2024-12-05 11:42:58 |
| enact-SO |
0.1.4 |
ENACT is the first tissue-agnostic pipeline that integrates advanced cell segmentation with Visium HD transcriptomics data to infer cell types across whole tissue sections. This pipeline incorporates novel bin-to-cell assignment methods, enhancing the accuracy of single-cell transcript estimates. |
2024-11-20 01:07:58 |
| omilayers |
0.2.3 |
A SQLite and DuckDB wrapper suitable for bioinformatic analysis of multi-omic data. |
2024-10-22 08:47:56 |
| gemcat |
1.4.0 |
A toolbox for gene expression-based prediction of metabolic alterations |
2024-10-05 21:07:38 |
| pypath-omnipath |
0.16.17 |
Molecular signaling prior knowledge processing |
2024-10-02 12:21:35 |
| atlasapprox |
0.2.4 |
Cell atlas approximations, Python API |
2024-09-19 09:36:18 |
| networkcommons |
0.4.3 |
Integrated framework for network inference and evaluation using prior knowledge and omics data |
2024-09-17 15:25:05 |
| decoupler |
1.7.0 |
Ensemble of methods to infer biological activities from omics data |
2024-06-20 13:18:32 |