| Name | Version | Summary | date |
| QMAP-Benchmark |
0.0.0 |
Benchmark for AMP MIC regression with a Toolkit to split peptide sequences datasets into independent sets based on pseudo identity |
2025-08-18 14:43:08 |
| pyfamsa |
0.6.0 |
Cython bindings and Python interface to FAMSA, an algorithm for ultra-scale multiple sequence alignments. |
2025-08-14 00:36:55 |
| scoring-matrices |
0.3.3 |
Dependency free, Cython-compatible scoring matrices to use with biological sequences. |
2025-08-13 17:47:42 |
| batchtensor |
0.1.0 |
Functions to manipulate batches of PyTorch tensors |
2025-08-09 04:38:52 |
| discoss |
0.1.1 |
Distributed Coordinated Sequence Sampler |
2025-08-03 15:36:42 |
| sequifier |
0.6.2.5 |
Train a transformer model with the command line |
2025-07-29 11:23:11 |
| gene-fetch |
1.0.14 |
Gene Fetch: High-throughput NCBI Sequence Retrieval Tool |
2025-07-28 12:34:51 |
| peptides |
0.4.0 |
Physicochemical properties, indices and descriptors for amino-acid sequences. |
2025-07-25 16:25:29 |
| seqtk-rs |
0.2.0 |
This is a sequence processing tool written in Rust for manipulating FASTA/FASTQ files. Pure rust version of seqtk. |
2025-07-22 01:24:03 |
| clipstitcher |
0.2.6 |
A python package for quick cutting video sequences |
2025-07-18 12:17:25 |
| refget |
0.8.0 |
Python client for refget |
2025-03-11 21:31:04 |
| mmseqspy |
0.2.0 |
Python utilities for protein sequence clustering and dataset splitting with MMseqs2 |
2025-02-26 17:42:10 |
| cladetime |
0.3.0 |
Assign clades to SARS-CoV-2 genome sequences at a point in time. |
2025-01-29 03:21:39 |
| rnajena-sugar |
0.5.0 |
A Python framework for bioinformatics |
2025-01-23 15:43:53 |
| ISCT |
0.1.2 |
Interpretable Sequence Clustering Tree |
2025-01-12 15:05:14 |
| pyhmmer |
0.11.0 |
Cython bindings and Python interface to HMMER3. |
2025-01-10 04:20:49 |
| pyncbitk |
0.1.0a1 |
Cython bindings and Python interface to the NCBI C++ Toolkit. |
2024-12-12 16:55:18 |
| escapyde |
1.0.2 |
Yet another ANSI escape sequence library for Python - now modernised! |
2024-12-03 11:52:33 |
| fastapy |
1.0.5 |
A lightweight Python module to read and write FASTA sequence records |
2024-11-17 10:56:56 |
| lazystuff |
1.2.0 |
Lazy-ish list-like objects for streaming APIs. |
2024-11-07 14:24:36 |