| Name | Version | Summary | date |
| flatiron-cleaner |
0.1.4 |
A Python package for cleaning and harmonizing Flatiron Health cancer data |
2025-10-30 05:30:51 |
| lymph-model |
1.3.7 |
Package for statistical modelling of lymphatic metastatic spread. |
2025-10-23 08:53:04 |
| pvactools |
5.5.4 |
A cancer immunotherapy tools suite |
2025-10-10 19:35:41 |
| vstol |
0.4.1 |
None |
2025-07-28 19:38:19 |
| HCSIM |
1.2.0 |
HCSIM: A Single-Cell Genomics Simulator with Haplotype-Specific Copy Number Annotation. |
2024-12-17 08:22:29 |
| genepioneer |
1.0.3 |
A Python package for identifying essential genes in cancer. |
2024-12-08 15:26:13 |
| cptac |
1.5.14 |
Python packaging for CPTAC data |
2024-06-06 18:29:01 |
| jpl.edrn.ldap.sync |
2.0.2 |
LDAP utilities for the Early Detection Research Network Directory |
2024-05-02 22:16:15 |
| cancer_data |
0.3.6 |
Preprocessing for various cancer genomics datasets |
2024-04-07 16:59:00 |
| vatools |
5.1.1 |
A tool for annotating VCF files with expression and readcount data |
2024-02-05 15:34:46 |
| cg-gnn |
0.3.2 |
Train a graph neural network on cell graphs. |
2024-01-18 22:38:40 |
| omnipath |
1.0.8 |
Python client for the OmniPath web service |
2023-11-20 18:42:58 |
| congas |
0.0.78 |
Copy Number genotyping from single cell RNA sequencing |
2023-10-03 10:11:09 |
| ngs-destruct |
0.4.21 |
Destruct is a tool for joint prediction of rearrangement breakpoints from single or multiple tumour samples |
2023-09-26 16:50:22 |
| prostate-nomograms |
0.0.9 |
Prediction tools based on existing prostate cancer nomograms. |
2023-06-19 17:15:28 |
| clumps-ptm |
0.0.6 |
CLUMPS-PTM driver gene discovery using 3D protein structure (Getz Lab). |
2023-04-17 14:32:11 |
| neoloop |
0.4.3.post2 |
Predict neo-loops induced by structural variations |
2023-03-13 01:36:29 |
| dicomcrop |
0.6 |
Prepare bedside medical images for machine learning and image interpretation. |
2023-01-29 23:28:47 |