| Name | Version | Summary | date |
| cooltools |
0.7.1 |
Analysis tools for genomic interaction data stored in .cool format |
2024-07-01 23:18:36 |
| swifr |
2.2.1 |
SWIF(r) - SWeep Inference Framework(controlling for correlation) - package for detecting adaptation in population data |
2024-06-26 17:47:43 |
| pegasusio |
0.9.1 |
Pegasusio is a Python package for reading / writing single-cell genomics data |
2024-06-12 16:49:08 |
| mitywgs |
1.1.0 |
A sensitive Mitochondrial variant detection pipeline from WGS data |
2024-06-07 03:51:08 |
| cptac |
1.5.14 |
Python packaging for CPTAC data |
2024-06-06 18:29:01 |
| fastqwiper |
2024.1.93 |
An ensemble method to recover corrupted FASTQ files, drop or fix pesky lines, remove unpaired reads, and fix reads interleaving |
2024-05-26 07:23:00 |
| hAMRonization |
1.1.7 |
Tool to convert and summarize AMR gene detection outputs using the hAMRonization specification |
2024-05-21 21:13:04 |
| blasttools |
0.1.16 |
Commands for turning blast queries into pandas dataframes. |
2024-05-14 10:29:32 |
| seqlogo |
5.29.9 |
Python port of the R Bioconductor `seqlogo` package |
2024-05-03 14:16:10 |
| hiscanner |
0.2a0 |
High-resolution copy number variant calling in single-cell whole-genome sequencing. |
2024-04-11 15:38:05 |
| cgatcore |
0.6.16 |
cgatcore : the Computational Genomics Analysis Toolkit |
2024-04-02 07:28:45 |
| pegasuspy |
1.9.1.post1 |
Pegasus is a Python package for analyzing sc/snRNA-seq data of millions of cells |
2024-03-16 08:16:11 |
| neosv |
0.0.4 |
Neoantigens from Structural Variations |
2024-03-15 08:39:27 |
| sbsgenerator |
1.0.5 |
Blazingly fast SBS matrix generator library |
2024-03-14 22:57:36 |
| cellxgene-gateway |
0.4.0 |
Cellxgene Gateway |
2024-03-10 13:37:09 |
| phic |
2.0.13 |
Polymer dynamics deciphered from Hi-C data |
2024-02-09 09:18:30 |
| genepattern-python |
24.1 |
Library for programmatically interacting with GenePattern from Python. |
2024-01-26 19:48:51 |
| mutalyzer-algebra |
1.5.1 |
A Boolean Algebra for Genetic Variants |
2024-01-16 09:36:48 |
| DSBplot |
0.1.3 |
A package for visualizing alignment variations in DNA-seq data from double-strand break (DSB) experiments. |
2024-01-12 00:29:41 |
| harmony-pytorch |
0.1.8 |
Pytorch implementation of Harmony algorithm on single-cell sequencing data integration |
2024-01-07 21:36:56 |