SOAPy-st

Name	SOAPy-st JSON
Version	0.1.4 JSON
	download
home_page	https://github.com/LiHongCSBLab/SOAPy
Summary	Spatial Omics Analysis in Python
upload_time	2024-01-02 13:39:15
maintainer
docs_url	None
author	Cancer system biology lab
requires_python	>=3.9
license
keywords	bio-informatics spatial data analysis spatial omics spatial transcriptomics
VCS
bugtrack_url
requirements	No requirements were recorded.
Travis-CI	No Travis.
coveralls test coverage	No coveralls.

            # SOAPy: A package for **S**patial-**O**mics **A**nalysis in **Py**thon

## Brief Introduction
**SOAPy** is an integrated toolkit that focuses on addressing spatial heterogeneity. SOAPy contains four data
preprocessing modules (“Data Import”, “spatial network”, and “Spatial Domain”), three modules for analyzing spatial
expression patterns of genes (“Spatial Variation”, “Spatial Tendency”, and “Spatiotemporal Pattern”), two modules
for analyzing the spatial architecture of cells (“Spatial Proximity”, “Spatial Composition”), and two module for
analyzing Spatial Communication.

## Github

https://github.com/LiHongCSBLab/SOAPy/

## Installation
pip:
```
    pip install SOAPy-st
```
github:
```
    cd SOAPy-st
    python setup.py build
    python setup.py install
```

            

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