| Name | Version | Summary | date |
| empathi |
1.0.6 |
An embedding-based phage protein annotation tool by hierarchical assignment |
2025-08-24 04:39:26 |
| nim-mmcif |
0.0.18 |
mmCIF parser written in Nim with Python bindings |
2025-08-24 00:06:41 |
| alphaquant |
0.2.0 |
An open-source Python package of the AlphaPept ecosystem |
2025-08-22 08:35:28 |
| omniplate |
2.11.12 |
For analysing and meta-analysing plate-reader data |
2025-08-21 13:36:24 |
| igvf-utils |
3.1.0 |
Client and tools for IGVF data submitters. |
2025-08-20 18:35:00 |
| biomarker-mcp |
0.2.1 |
Natural language interface for celltype marker query through MCP. |
2025-08-20 17:45:00 |
| remag |
0.2.3 |
Recovery of high-quality eukaryotic genomes from complex metagenomes |
2025-08-20 09:45:19 |
| ragulate-bio |
0.1.1 |
Retrieval augmented validation for TF inference in single cell biology |
2025-08-19 21:26:39 |
| evoaug2 |
2.0.3 |
Evolution-Inspired Data Augmentation for Genomic Sequences - DataLoader Version |
2025-08-19 19:59:17 |
| pypolca |
0.4.0 |
Standalone Python implementation of the POLCA polisher from MaSuRCA |
2025-08-19 06:53:22 |
| bioforklift |
0.2.3 |
Package for handling bioinformatics data automations between data sources |
2025-08-18 17:11:10 |
| saxsmart |
1.0.0 |
SAXSMART: SAXS modeling and refinement toolkit (Dash app) |
2025-08-18 07:09:37 |
| scoda-viz |
0.4.20 |
Visualization Toolkits for SCODA results. |
2025-08-15 16:18:50 |
| PyMaSC |
1.0.0 |
Python implementation to calc mappability-sensitive cross-correlation for fragment length estimation and quality control for ChIP-Seq. |
2025-08-15 15:19:36 |
| emdb |
0.1.9 |
A Python client for accessing the Electron Microscopy Data Bank (EMDB) |
2025-08-13 10:26:59 |
| mdeq |
2025.6.30 |
mdeq: mutation disequilibrium analysis tools. |
2025-08-13 07:11:57 |
| varseek |
0.1.1 |
Efficient variant screening of RNA-seq and DNA-seq data using k-mer-based alignment against a reference of known variants. |
2025-08-12 08:17:59 |
| ensembl-tui |
0.4.3 |
Ensembl terminal user interface tools |
2025-08-12 05:30:48 |
| friend-or-foe |
1.0.1 |
A collection of microbial datasets obtained from metabolic modeling for machine learning research |
2025-08-11 12:42:55 |
| mlbi-datasets |
0.2.3 |
MLBI Lab Datasets |
2025-08-10 04:45:00 |