PyDigger - unearthing stuff about Python


NameVersionSummarydate
changeo 1.3.0 A bioinformatics toolkit for processing high-throughput lymphocyte receptor sequencing data. 2022-12-12 00:08:27
optipyzer 0.4.1 Codon optimize DNA and Protein sequences for multiple species. 2022-12-11 01:26:40
zarp 0.1.1 User-friendly command-line interface for the ZARP RNA-Seq analysis pipeline 2022-12-02 02:26:59
s-rna-tools 0.0.3 Tools for handling Small RNA sequences. 2022-11-30 14:43:19
hgvs 1.5.4 HGVS Parser, Formatter, Mapper, Validator 2022-11-21 20:03:51
kipoi-utils 0.7.7 kipoi-utils: utils used in various packages related to kipoi 2022-11-04 12:47:55
biobakery-workflows 3.1 bioBakery workflows: A collection of meta'omic analysis workflows 2022-09-27 13:40:33
npysearch 1.3.1 Python bindings for nsearch, an efficient BLAST-like sequence comparison algorithm written in C++ 2022-09-20 10:14:51
scglue 0.3.2 Graph-linked unified embedding for unpaired single-cell multi-omics data integration 2022-08-26 12:41:45
sample-sheet 0.13.0 An Illumina Sample Sheet parsing library 2022-08-12 02:21:02
kipoi 0.8.6 Kipoi: model zoo for genomics 2022-07-29 11:07:30
tolkein 0.5.0 Tree of Life Kit of Evolutionary Informatics Novelties 2022-07-12 12:10:36
intermine 1.13.0 InterMine WebService client 2022-04-28 16:22:31
kipoi-conda 0.3.1 kipoi-conda: conda/pip related functionality used by Kipoi 2022-04-13 13:43:11
PyVCF3 1.0.3 Variant Call Format (VCF) parser for Python 2022-02-15 11:43:13
refgenie 0.12.1 Refgenie creates a standardized folder structure for reference genome files and indexes. You can download pre-built genomes or build your own for any fasta file 2021-11-04 16:58:07
kipoiseq 0.7.1 kipoiseq: sequence-based data-loaders for Kipoi 2021-10-27 15:39:29
ruffus 2.8.4 Light-weight Python Computational Pipeline Management 2020-04-24 19:58:08
kipoi-veff 0.3.1 kipoi_veff: variant effect prediction plugin for Kipoi 2019-12-22 17:53:03
eutils 0.6.0 "Python interface to NCBI's eutilities API" 2019-12-17 19:19:18
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