PyDigger - unearthing stuff about Python


NameVersionSummarydate
kipoiseq 0.7.1 kipoiseq: sequence-based data-loaders for Kipoi 2021-10-27 15:39:29
ruffus 2.8.4 Light-weight Python Computational Pipeline Management 2020-04-24 19:58:08
kipoi-veff 0.3.1 kipoi_veff: variant effect prediction plugin for Kipoi 2019-12-22 17:53:03
eutils 0.6.0 "Python interface to NCBI's eutilities API" 2019-12-17 19:19:18
nimfa 1.4.0 A Python module for nonnegative matrix factorization 2019-10-10 00:03:15
micomplete 1.1.1 Quality control of assembled genomes 2019-07-25 16:05:10
ypkpathway 3.0.1 Simulation and documentation of metabolic pathway assemblies using the Yeast Pathway Kit. 2019-06-11 12:27:59
pypairix 0.3.7 Pypairix is a Python module for fast querying on a pairix-indexed bgzipped text file that contains a pair of genomic coordinates per line. For more information, see: https://github.com/4dn-dcic/pairix/blob/master/README.md. 2019-04-11 16:03:21
velocyto 0.17.17 RNA velocity analysis for single cell RNA-seq data 2019-01-31 14:02:25
markov-clustering 0.0.6.dev0 Implementation of the Markov clustering (MCL) algorithm in python. 2018-12-11 12:33:06
GSVA 1.0.6 Python CLI and module for running the GSVA R bioconductor package with Python Pandas inputs and outputs. 2018-07-08 15:22:48
alfpy 1.0.6 Alignment-free package to compare DNA/RNA/protein sequences (bioinformatics). 2018-03-13 07:04:44
biomart 0.9.2 Python API that consumes the biomart webservice 2017-01-22 18:08:15
PyVCF 0.6.8 Variant Call Format (VCF) parser for Python 2016-03-18 16:19:46
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