| Name | Version | Summary | date |
| pyMSAviz |
0.5.0 |
MSA visualization python package for sequence analysis |
2024-09-14 03:25:51 |
| IRescue |
1.1.2 |
Interspersed Repeats singl-cell quantifier |
2024-09-12 16:20:05 |
| checkQC |
4.0.5 |
A simple program to parse Illumina NGS data and check it for quality criteria. |
2024-09-12 09:09:32 |
| peptides |
0.3.4 |
Physicochemical properties, indices and descriptors for amino-acid sequences. |
2024-09-09 11:51:45 |
| WDL-AID |
1.0.1 |
Automatic Input Documentation for WDL workflows |
2024-09-05 12:19:27 |
| edlib |
1.3.9.post1 |
Lightweight, super fast library for sequence alignment using edit (Levenshtein) distance. |
2024-09-04 21:44:21 |
| dsub |
0.5.0 |
A command-line tool that makes it easy to submit and run batch scripts in the cloud |
2024-09-03 22:12:24 |
| dima-cli |
5.0.9 |
A command-line tool that analyses the diversity and motifs of biological sequences |
2024-09-03 14:37:35 |
| lightmotif |
0.9.1 |
PyO3 bindings and Python interface to lightmotif, a library for platform-accelerated biological motif scanning using position weight matrices. |
2024-09-02 22:37:25 |
| blast2galaxy |
1.0.0 |
A Python package providing a CLI and API to perform BLAST+ and DIAMOND queries against public or private Galaxy servers |
2024-09-02 13:15:41 |
| pytrimal |
0.8.0 |
Cython bindings and Python interface to trimAl, a tool for automated alignment trimming. |
2024-08-28 14:26:57 |
| plastburstalign |
0.9.1 |
A Python tool to extract and align genes, introns, and intergenic spacers across hundreds of plastid genomes using associative arrays |
2024-08-27 22:57:52 |
| snps |
2.9.0 |
tools for reading, writing, merging, and remapping SNPs |
2024-08-26 05:03:24 |
| camlhmp |
1.1.0 |
Classification through yAML Heuristic Mapping Protocol |
2024-08-25 16:53:17 |
| jeddinformatics |
0.7.0 |
Convert bioinformatics data to plots |
2024-08-25 12:23:54 |
| satute |
1.0.6 |
SatuTe (Saturation Test) is a Python-based tool designed to test for phylogenetic information in phylogenetic analyses. The absence of phylogenetic information can be considered saturation. In two sequences, saturation occurs when multiple substitutions obscure the true genetic distances, potentially leading to artifacts and errors. |
2024-08-23 12:11:44 |
| spruceup |
2024.8.20.post1 |
A module for lexible identification, visualization, and removal of outliers from large multiple sequence alignments |
2024-08-20 23:28:07 |
| readfish-summarise |
0.2.7 |
A blazingly fast Python/Rust library for summarising readfish FASTQ output |
2024-08-20 15:50:19 |
| pyrodigal-gv |
0.3.2 |
A Pyrodigal extension to predict genes in giant viruses and viruses with alternative genetic code. |
2024-08-15 14:43:43 |
| singlem |
0.18.3 |
Novelty-inclusive microbial community profiling of shotgun metagenomes |
2024-08-13 22:29:30 |