| Name | Version | Summary | date |
| patientMatcher |
4.5 |
A python and MongoDB-based Matchmaker Exchange server |
2023-11-07 10:01:34 |
| fastqwiper |
2023.2.82 |
An ensamble method to recover corrupted FASTQ files, drop or fix pesky lines, remove unpaired reads, and fix reads interleaving |
2023-10-30 19:59:28 |
| pygenomeviz |
0.4.4 |
A genome visualization python package for comparative genomics |
2023-10-28 09:11:14 |
| parallel-augustus |
1.0.2 |
Simple wrapper around Augustus to bring faster restitution times |
2023-10-19 10:07:59 |
| ngsderive |
4.0.0 |
Forensic analysis tool useful in backwards computing information from next-generation sequencing data. |
2023-10-04 16:19:25 |
| pyllelic |
0.4.8 |
Analysis of allele-specific methylation in bisulfite DNA sequencing. |
2023-09-19 18:44:53 |
| snpio |
1.0.5.2 |
Reads and writes VCF, PHYLIP, and STRUCTURE files and performs data filtering on the alignment. |
2023-09-17 09:53:05 |
| cooler |
0.9.3 |
Sparse binary format for genomic interaction matrices. |
2023-09-11 22:57:23 |
| hybkit |
0.3.3 |
Toolkit for analysis of chimeric (hybrid) RNA sequence data. |
2023-09-05 18:07:09 |
| HaploDynamics |
0.4b1 |
A python library to develop genomic data simulators |
2023-08-25 22:13:05 |
| deepBreaks |
1.1.2 |
deepBreaks: a machine learning tool for identifying and prioritizing genotype-phenotype associations |
2023-08-18 16:05:20 |
| lib310-lite |
0.1.1 |
lib310 Lite Python Package |
2023-08-09 17:11:56 |
| fastlmmclib |
0.0.3 |
Fast GWAS C library |
2023-08-09 15:06:17 |
| lakeview |
0.2.0 |
A Python library for creating publication-quality genome visualisations. |
2023-07-26 14:56:16 |
| graphbin |
1.7.1 |
graphbin: Refined binning of metagenomic contigs using assembly graphs. |
2023-07-25 02:17:56 |
| pytrimal |
0.7.0 |
Cython bindings and Python interface to trimAl, a tool for automated alignment trimming. |
2023-07-21 19:17:59 |
| pyreference |
0.7.5 |
Library for working with reference genomes and gene GTF/GFFs |
2023-07-10 09:21:35 |
| bioutils |
0.5.8.post1 |
miscellaneous simple bioinformatics utilities and lookup tables |
2023-07-10 04:29:58 |
| pyranges |
0.0.129 |
GenomicRanges for Python. |
2023-06-29 14:17:10 |
| ga4gh.vrsatile.pydantic |
0.0.13 |
"Translation of the GA4GH VRS and VRSATILE Schemas to a Pydantic data model" |
2023-06-27 18:03:18 |