# Next Generation Sequencing fragment manipulation
[](https://travis-ci.org/kylessmith/NGSfragments) [](https://badge.fury.io/py/NGSfragments)
This is a Python package for easy and efficient manipulation
of Next Generation Sequencing reads.
## Install
If you dont already have numpy and scipy installed, it is best to download
`Anaconda`, a python distribution that has them included.
```
https://continuum.io/downloads
```
Dependencies can be installed by:
```
pip install -r requirements.txt
```
PyPI install, presuming you have all its requirements installed:
```
pip install NGSfragments
```
## Usage
```python
from NGSfragments import fragments
import numpy as np
# Create data
frags = fragments("test_bam.bam", verbose=True)
```
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