| Name | Version | Summary | date |
| sonicparanoid |
2.0.9 |
SonicParanoid: fast, accurate, and comprehensive orthology inference with machine learning and language models |
2025-09-12 06:31:56 |
| diverge |
4.0.2 |
DIVERGE 4.0: A Python package for detecting functional divergence in protein family evolution |
2024-10-12 02:29:13 |
| aegis-sim |
2.3.0.2 |
Numerical model for life history evolution of age-structured populations |
2024-09-27 12:40:31 |
| geonomics |
1.4.6 |
A package for landscape genomic simulation |
2024-09-14 03:40:08 |
| LAML |
0.0.4 |
LAML: Lineage Analysis via Maximum Likelihood |
2024-07-22 18:53:09 |
| evogym |
2.0.0 |
Evolution Gym: A benchmark for developing and evaluating soft robot co-design algorithms. |
2024-07-09 02:29:48 |
| DendroPy |
5.0.1 |
A Python library for phylogenetics and phylogenetic computing: reading, writing, simulation, processing and manipulation of phylogenetic trees (phylogenies) and characters. |
2024-06-02 07:40:15 |
| evolve-words |
0.2.1 |
A simple illustration of mutation aiding evolution |
2024-04-10 11:22:48 |
| pyploid |
1.1.5 |
Framework for building experiments or educational material regarding evolutionary algorithms and genetics. |
2024-02-22 23:27:52 |
| opqua |
1.2.1 |
An epidemiological modeling framework for population genetics and evolution. |
2024-02-01 20:12:40 |
| scmail |
1.0.9 |
sc-MAIL: single-cell Maximum-likelihood Ancestral Inference for Lineage-tracing |
2024-01-31 19:29:25 |
| doublemanning |
1.0.0a0 |
Stage-discharge relationships: double-Manning approach |
2023-12-09 23:49:59 |
| transcriptorthology |
3.0.2 |
Algorithm to address Orthology and Paralogy at the Transcript Level |
2023-12-02 02:44:05 |
| evotorch |
0.5.0 |
EvoTorch is an advanced evolutionary computation library built directly on top of PyTorch, created at NNAISENSE. |
2023-11-02 10:11:09 |
| visual-selection |
0.2.0 |
A simple illustration of mutation aiding evolution |
2023-10-28 08:34:02 |
| MetEvolSim |
1.0.0 |
MetEvolSim (Metabolome Evolution Simulator) Python Package |
2023-09-23 09:55:41 |
| game-simulator |
0.8 |
Creates simulations of any n*n game specified with payoff matrix |
2023-09-15 16:06:20 |
| OTTAR |
0.5.0 |
Ode To Transient Ancho de los Rivers: Transient evolution of river-channel width |
2023-07-18 11:39:04 |
| GRLP |
1.8.0 |
Evolves gravel-bed river long profiles |
2023-07-04 14:57:29 |
| hsuanwu |
0.0.1b7 |
Long-Term Evolution Project of Reinforcement Learning |
2023-05-15 05:05:59 |