| Name | Version | Summary | date |
| ghfc-utils |
0.1.13 |
Various genomics tools and scripts used in the GHFC lab |
2025-02-21 23:08:19 |
| odm-sdk |
1.59.8 |
SDK for interacting with the Open Data Manager |
2025-02-21 11:30:49 |
| pybigtools |
0.2.4 |
Python bindings to the Bigtools Rust library for high-performance BigWig and BigBed I/O |
2025-02-11 04:42:34 |
| RNApysoforms |
1.0.1 |
A Python package designed for visualizing RNA isoform structures and expression levels by leveraging Plotly for interactive plotting and Polars for efficient data manipulation, enabling the creation of fast-rendering, interactive plots. |
2025-02-11 01:01:58 |
| igv-notebook |
0.6.2 |
Package for embedding the igv.js genome visualization in IPython notebooks |
2025-02-07 18:03:22 |
| hiscanner |
0.2b5 |
High-resolution single-cell copy number analysis. |
2025-02-06 22:21:17 |
| rustbam |
0.1.8 |
A Rust-based BAM depth calculator for Python. |
2025-02-05 16:41:58 |
| cpg-flow |
0.1.2 |
CPG Flow API for Hail Batch |
2025-02-05 03:10:35 |
| FinaleToolkit |
0.10.7 |
FinaleToolkit is a package and standalone program to extract fragmentation features of cell-free DNA from paired-end sequencing data. |
2025-02-02 23:11:47 |
| ga4gh.cat-vrs |
0.2.1 |
GA4GH Categorical Variation Representation (Cat-VRS) reference implementation |
2025-01-23 18:59:11 |
| varscore |
0.0.1a0 |
A library for common functions in variant effect prediction & prioritization. |
2025-01-17 23:39:08 |
| prymer |
3.0.0 |
Python primer design library |
2025-01-14 20:05:47 |
| pyfastani |
0.6.1 |
Cython bindings and Python interface to FastANI, a method for fast whole-genome similarity estimation. |
2025-01-12 04:32:14 |
| pandaspgs |
0.2.0 |
A Python package for easy retrieval of PGS Catalog data |
2025-01-09 07:35:00 |
| somaticseq |
3.10.0 |
SomaticSeq: An ensemble approach to accurately detect somatic mutations using SomaticSeq |
2025-01-01 23:58:14 |
| rsbio-seq |
0.1.5 |
RSBio-Seq is a fast and light-weight sequence reading library (built on top of rust bio crate). |
2024-12-31 00:43:20 |
| diverse-seq |
2024.12.26a1 |
diverse_seq: a tool for sampling diverse biological sequences |
2024-12-26 03:33:53 |
| pygenomeviz |
1.5.0 |
A genome visualization python package for comparative genomics |
2024-12-21 02:44:56 |
| singlecell-cookbook |
0.3.1 |
A collection of tools for analyzing single-cell genomics data. |
2024-12-19 00:53:42 |
| CNSistent |
0.7.1 |
Tools for imputation, segmentation, analysis, and plotting of Copy Number Segments (CNS). |
2024-12-16 23:53:45 |